Gene Franean1_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4458 
Symbol 
ID5672809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5325237 
End bp5326145 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID641243326 
Productalpha/beta hydrolase fold 
Protein accessionYP_001508742 
Protein GI158316234 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCCGGGTGTC AGCGGCGAGC GCGCTGACGA ATCTGGCCGG TCGCTTCCGC 
CTGCCCGGGA TCGACCTGCA GGCGGACTGC TACGGCGACC CGGGCGGGGT GCCGGTCGTG
TTCGCGCACG GCGGCGGCCA GACCCGGCAC GCCTGGGGAA GCGCGGCCAC GGCGGTCGCC
CGGGACGGGT ACTGGGCGAT CTCGCTCGAC CTGCGCGGGC ACGGCGAGAG CGGCTGGGCG
GAGGACGGCG ACTACACGTT CGCGGTCTAC GCCCGCGATC TGAGCCTGCT CGCCGCCACC
CTGCCCAACC CGCCGATCTT CGTCGGCGCC TCGGTCGGCG GCCTCGCGGC GCTGCTGACC
GTCGGCGAGT TCGGAACGGC GGCCAAGGCA CTTGTCCTCG TTGACGTCGT CCCGGACCCC
GCCGTCGAGG GCTCCGAGCG CGTGCTGGCG TTCATGCGCA GCGGCATCGA CGGCTTCGAC
AACGTCGAGG CCGTCGCCGA CGCGATCTCC GAGTACCTAC CCGAACGGCG CCGGCCGACG
GACCTGACCG GCCTGCGCAA GAACCTCCGC CAGCACGCCG ACGGCCGGCT GTTCTGGCAC
TGGGATCCCC GCCTCGTCGC CGGGAACCGC CTTCCGAGCC GGGAGGACGT AGCCCGGTTC
TACCGGGCCA GCAGCGCGAT CACCGTGCCC GCGTTGCTGC TGCGCGGCGG ACGCAGCGAC
GTCGTCGTCA ACGATGGCGT GCAGGGTCTA CTCGACTCCA ACCCGCTGTT CGAGCTCGAA
GAGATCGCCG ACGCTGGCCA TATGGTCGCC GGCGACCGCA ACGACCGCTT CACTGAGGCA
CTGCGCCGGT TCCTACAGCG GCTCGACCCC GACACCGCCC GTCCGGTCCC GCGTTCGCAG
CACCCGTGA
 
Protein sequence
MSATRVSAAS ALTNLAGRFR LPGIDLQADC YGDPGGVPVV FAHGGGQTRH AWGSAATAVA 
RDGYWAISLD LRGHGESGWA EDGDYTFAVY ARDLSLLAAT LPNPPIFVGA SVGGLAALLT
VGEFGTAAKA LVLVDVVPDP AVEGSERVLA FMRSGIDGFD NVEAVADAIS EYLPERRRPT
DLTGLRKNLR QHADGRLFWH WDPRLVAGNR LPSREDVARF YRASSAITVP ALLLRGGRSD
VVVNDGVQGL LDSNPLFELE EIADAGHMVA GDRNDRFTEA LRRFLQRLDP DTARPVPRSQ
HP