| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4457 |
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| Symbol | |
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| ID | 5672808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5324476 |
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| End bp | 5325240 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243325 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508741 |
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| Protein GI | 158316233 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAA GACTCGACGG GCGGGTGGCC CTCGTCACCG GTGCTTCGAA GGGCATCGGG
CTGGCGATCG CGACCGGGTT CGCCCGGGCA GGCGCTTCGG TGATGCTCGT CTCGCGCAAG
AAGACCGCGC TGGACGAGGC CCTTGAAGGC CTCCCGTCCT CCTGCGCGGC GTTCGCCGCC
AACGCCGGCG ACCCGGACGC CGCGGCCGCG GCGGTCGAGG CGACCCGCGC GCAGTTCGGC
CGGGTCGACA TATTGGTCAA CAACGCCGCG ACGAACCCGT ACGTGGGGCC CCTCAGCGAG
ATCGACCTGG CCCGCGCCGA GAAGACCGTG CTGGTCAACC AGTACGGGCC GATTCTCTGG
TCGCGCCTGG CGTACGACGC CTGGATGCGT GAACACGGCG GGGTGATCCT GAACGTCGCC
TCGGTCGGCG CCTACGTCGT CTCGCCCGGG ATCGGGTACT ACGACGCCAC GAAGGCCGCC
CTGCTGTCGA TCACGAAACA CCTCGCGTGG GAGATGTCGC CGAAGGTCCG GGTGAACGCC
ATCGCCCCGG GCGTCGTCAA GACCGAGATG GCCCGCGCGA TCTGGGAGGG CCACGAGCAG
GAGATGATCG CCGGCTCCCT GCTCGGGAGG CTGGGTGAGC CGGAGGACGT GGGGAACCTC
GCGGTCTTCC TCGCGTCCGA CGCCGCAAGC TGGATCACCG GCTCGACCTA CGTCATCGAC
GGGGGCGCAC TCGCGGTTCC CCCCGGCGGG ACGCACATGC AATGA
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| Protein sequence | MEIRLDGRVA LVTGASKGIG LAIATGFARA GASVMLVSRK KTALDEALEG LPSSCAAFAA
NAGDPDAAAA AVEATRAQFG RVDILVNNAA TNPYVGPLSE IDLARAEKTV LVNQYGPILW
SRLAYDAWMR EHGGVILNVA SVGAYVVSPG IGYYDATKAA LLSITKHLAW EMSPKVRVNA
IAPGVVKTEM ARAIWEGHEQ EMIAGSLLGR LGEPEDVGNL AVFLASDAAS WITGSTYVID
GGALAVPPGG THMQ
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