Gene Franean1_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4443 
Symbol 
ID5672795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5307983 
End bp5308426 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content71% 
IMG OID641243312 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_001508728 
Protein GI158316220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCA CCGCCGAGAT CGACGACCTC AACCGCCGGT TGGCCGCCGT GCTCAACCGC 
CACGCACCCG CCCTGCTCGC CAGGGTCGGC GTCGGACCGG ACACCGCCGC GGCGCTGCTC
ATCGTCGCCG GCGACAACCC GCGACGGCTG ACCAGCGACC GATCCTTCGC GGCACTGTGC
GGGGTGAGCC CGATCGAGGC CTCGTCCGGG AAGACCCGCC GACACCGCCT CCATCGCGGC
GGCGACCGCC AGGCCAACTC CGCGCTGCAC CGCATCGTCA TCACCCGGCT GCGCTGCGAC
CCCCGCACCC GCGCCTACCA GCAACGACGC CTCACCGAAG GCAAAACCCC ACGCGAAATC
GTCCGCTGCC TCAAGCGCTA CATCGCCCGC GAGATCTACA ACGCCATCCC GCGCACCAAC
CCACCGGCCA CCGCGACTAC TTGA
 
Protein sequence
MALTAEIDDL NRRLAAVLNR HAPALLARVG VGPDTAAALL IVAGDNPRRL TSDRSFAALC 
GVSPIEASSG KTRRHRLHRG GDRQANSALH RIVITRLRCD PRTRAYQQRR LTEGKTPREI
VRCLKRYIAR EIYNAIPRTN PPATATT