Gene Franean1_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4263 
Symbol 
ID5672618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5088666 
End bp5089862 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content75% 
IMG OID641243136 
Productmonooxygenase FAD-binding 
Protein accessionYP_001508553 
Protein GI158316045 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000952252 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.156031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATGG CTGGTCGGCG GGCGCTGGTG ATCGGTGGGG GCATCGCGGG ACCCGCGGCG 
GCGATAGCGC TGGCCCGGGC CGGCATTCTT CCCACGGTCT TCGAGGCCGA CGCCGACCCG
GAGTCCGCCG GCAGCCTGCT GCTCGGCGTC GCCCCGAACG GCCTGCGCGG CCTGGAGCTT
CTCGGTGTCC AGGGCCTCGA CGAGGCCGGG CACCCCTCGG CGGGAAACCA TTTCGTCGAC
GTCCATGGCC GCCACCTCGG CACGATCGAG GCGCCCGCCC GGGTGATCCG CCGCAGCGAG
CTGCGGCGGG TGCTGCTGCG GGAACTCGAC CGGCGCGGGA TCCCGGTCGT TCCGGCGAGC
AGGTTCGACT CGGTCGACGA CCGGGGCGAG GCCAGCGTCC GCGCCTACTT CGCCGACGGC
TCCAGCGCCG TGGGCGACTT CCTGCTCGGC TGCGACGGCC TGCGCTCCCG GGTGCGCCGC
CACGTCGCGC CCGAGACGCC CTGGCCGACC TTCGCCGGCC TGGTGACCGT CGGCGGGTTC
GCGGACCGCG TCGGCCGCTC GTACAAGACC GGCATGCTCG AGTTCACCGT CGTCGGCACC
GGGACGTTCA TCCACTACGG CACGGCGGGC GGTGAGGTGA TGTGGGCGAT GTCGATGGTG
TCCGCCGACC CGTGGCCCTC ACCGCGCACC GACGCCGGCC AGGAGCAGGT GCGACGCCGG
CTGCTCACCC AGCTCGAGCA CGCCCCCGCC CACCTGCGGT CGGTCGTGGA CGCGACCGAC
CGGCTCGAGC GGCTCCCGCT GTCGGTCCTG GAGCCGGTCG GGACCTGGTA CCGCCGCAAC
GTCTGCCTGC TCGGGGACGC CGCCCACGCC ATGCTCCCGC ACGCCGGCCA GGGGGCGTCC
ATGGCGATCG AGGACGCGAT CGTGCTTGGC CGCTGCCTGC GCGACGCCCC GACGGCCCCC
ATCGGCTTCG CCGCCTACCG GGCGGCCCGC GCCGAGCGGG TGGCGCACGT CCACCGGCTG
GCCCGGCGCA ACCGGCCGCG CACCCCGCCG CCGAACGCCC CCGCCCGCTG GATGCGCGAC
CACATCGTCC CGGTGGCGAT GAAGGTCGGC CTGCGCCAGA TGGCCGCCAT GTACGACTAC
CGGATCGCCT GGGACGAGCC GTCCCCCGGC CGCGACCCGC TCTCAACCGT CTTCTGA
 
Protein sequence
MGMAGRRALV IGGGIAGPAA AIALARAGIL PTVFEADADP ESAGSLLLGV APNGLRGLEL 
LGVQGLDEAG HPSAGNHFVD VHGRHLGTIE APARVIRRSE LRRVLLRELD RRGIPVVPAS
RFDSVDDRGE ASVRAYFADG SSAVGDFLLG CDGLRSRVRR HVAPETPWPT FAGLVTVGGF
ADRVGRSYKT GMLEFTVVGT GTFIHYGTAG GEVMWAMSMV SADPWPSPRT DAGQEQVRRR
LLTQLEHAPA HLRSVVDATD RLERLPLSVL EPVGTWYRRN VCLLGDAAHA MLPHAGQGAS
MAIEDAIVLG RCLRDAPTAP IGFAAYRAAR AERVAHVHRL ARRNRPRTPP PNAPARWMRD
HIVPVAMKVG LRQMAAMYDY RIAWDEPSPG RDPLSTVF