Gene Franean1_4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4224 
Symbol 
ID5672579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5030483 
End bp5031196 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content75% 
IMG OID641243097 
Productinositol monophosphatase 
Protein accessionYP_001508514 
Protein GI158316006 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.206669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC ACGCACTCGC CGCGGCCCTC GCCGAGCAGG CGGGGTCCCT CCTCCTCGAT 
ATCCGCGGGC AGGGTGGGGC CCAGGGGGAT CGGCAGTCCA ACGAGCTGCT GCTGCGCCTG
CTCGCGCAGA CACGTCCGGG CGACGCCGTT CTGTCCGAGG AAAGCGCCGA CGATCCCGTC
CGCCTCACCC GGGGCCGGGT CTGGATCATC GACCCGCTCG ACGGGACCCG CGAGTACGGC
GAGCCGCCGC GAGACGACTG GGCCGTCCAC GTCGCCCTCG CCGTCAACGG GACACCCACC
GCGGGGGCGG TCGGACTGCC CGCCGCCGGC CTCGTGCTGC ACACCGGCGA ACCACCGGCC
CTCGCCGCCC CGACCTCCGG CCCGATCCGT CTCGCCGTCT CGCGCACCCG CCCACCCGCC
TGCGTCGACC AGCTTGTCGC CCGCCTGGAC GCGGCCCTGG TCCCCATGGG TTCCGCCGGC
GCCAAGGCGA TGGCGGTCGT CCGCGGCGAC GTCGACGTCT ACGCCCACTC CGGCGGCCAG
TACGAATGGG ACTCCGCCGC CCCCGTCGCC GTCGCCCACG CCGCGGGCCT GCACACCTCC
CGCCTCGACG GCGGACCCCT CCGCTACAAC GAGCCCAACC CCTACCTCCC CGACCTGCTC
ATCTGCCGCC CGGAGCTCGC CGACACCGTC CTGCGAGCAC TCCATGACGC CTGA
 
Protein sequence
MDDHALAAAL AEQAGSLLLD IRGQGGAQGD RQSNELLLRL LAQTRPGDAV LSEESADDPV 
RLTRGRVWII DPLDGTREYG EPPRDDWAVH VALAVNGTPT AGAVGLPAAG LVLHTGEPPA
LAAPTSGPIR LAVSRTRPPA CVDQLVARLD AALVPMGSAG AKAMAVVRGD VDVYAHSGGQ
YEWDSAAPVA VAHAAGLHTS RLDGGPLRYN EPNPYLPDLL ICRPELADTV LRALHDA