| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4209 |
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| Symbol | |
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| ID | 5672564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5011607 |
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| End bp | 5013994 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243082 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001508499 |
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| Protein GI | 158315991 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG CCGTGATGGA TGGGGGCCCG GTGACGTCCG AGACAAGCCA TGCCGACCCG
ACGACCCGGC CCTGGTCACG CAGCGGTCCG GGCCGGGCGG CGGCCGCGGA GACGTCCGCG
GCGAACCTCC TCGACAGCCT GAGCGAGGTG GTGTTCCGCA CCGACGCGGA GGGCCGCTGG
ACCTACCTGA ACCGGGCCTG GACCACCCTC ACCGGCTACG ACGTCGGCCC GAGCCTGGGC
GCCCGCTTCC TCGACTACGT CCACCCCGAC GAGGTCGAGT ACACGACCGC GCTGTTCATG
GGCGTGGTGC ACGGCGGCGC CGACCACTGC CACCACGAGA CCCGCTACCG CACCCGCCAC
GGTGGCTACC GGCAGGTACA GATCCGCGCG AACGTGCTGC GCGGCCCGTC CGGTGAGGTG
CTCGGCAACA CCGGCACGAT CCTCGACGTC ACCGACTCCC GGCTCGGCGC CGAGGCGGTC
GGGGAGCATG CCACGCTGCT GGAACTGATC ACCGCAGGCA CCGACCCCGA AGAGCTGCTG
ACGGGCGTCG CCGTCTACGA CCGCGACCTG CGGCTGCGCC GCGGCTCGCC GGTCGTCGAC
CGCCTGGTCG GCGCGCAGCT GCTTCCCGGG GACCCGCTCG ACCGGCTGGT CGAGCTGCTG
CACCCCGCTG ACTGGCAGAC ACGCTCCCTC GGCGGCGACT GGGGCCTGGT CGCGCTCGCC
CTGCGTACTC GTCGGGCACA GCTCGGCGAC CTCGAGCTGG CGGGCGAGCG GGGCACCGGC
CGGGCGCTGC GCGCCTCGGT GATCCCGTTC GACCAGGGCG GTGAGGAGAT GGCCGCGCTC
GTCCTGTCCG ACATCACCGA CCTGCGCCGG GCCGAGCGCC AGCAGGCCGG GCTCGCCCGG
CTCGGGCAGC GCGCGCTGGC AGATCTCGAC ATCCCGACCC TGCTCGCCGA GGCGGTCGGT
CTGGTCACCA CCACCCTGGA CGTCGCCGTC TGCGACGTGA TCCGCTGCGA ACCCGACGGC
GACCGGGCGA GCCTGGCCGA CGGTGCGAGC CTGGCCGACG GTCCCGAGCG CGCCGGTCTG
CCCGACGGAT CCGCCAACGG TTCATCCACC AGCGCCGCCG GTGGTGCTGG CGGGCCGGGG
GCCGGTGCGT CCGATCCCGG GCATCTCGCG CGCCTGACCG ACCCGTCGGC GCCGACCGCG
CCCACGCAGC TCGGCACCGG CCCGATCTAC CTGACCGGCA CGCTGGCGGC CGAGGCGAGC
TCACTCGTCC ACCTCGCGCT CGGCGTCGAC GAGCCCGTCG TGGCGAACGA CCTCGGAACC
CGTCCACACC TGCGCAGCGG GTGGTCCGAC GCCGGAGGCG CGCAGGCGGC GCTCGCGGCC
CGGATCGGCT CGGCCCGGTC ACCGTTCGGC GTGCTGGCCG CGGCCAGCAC ACGGCCGCGC
CGCTTCACCG GGGAGGAGTC ACGCTTCCTC CAGTCCGTGG CGAACATCCT CGGCGCGGCG
ATCGACCGGG ACCGCGCCGA GCGCCGGTCG CGGCAGCTCT ACGAGGAGGC CCAGCGCGGC
CGCGCGTGGC TGGCGGCCAG CGCGGAGATC ACCGCCGGCG CGCTGGTGGC CGGCCAGTCC
CAGCAGGCCT TCATGCTGCT CGCCTCGCTC GCCCGCGGCG TCACCTCGGC GGACGTCGGC
GCCGTGGCAC TACCCGACGA GGCGGGCAAC CTGGTCGCCA CCGAGGTCGA CTCGGCCCCC
CACCGCCACT CCGACCCGGA AATCCTGCAC AGCCTCGCGC TCGCACTCGA CGCGGCCGAG
AACCGTCCCG AGTTCCTGGC CGGACGTCCC GTGCACGTGG GCGATCTCGA CGCGACCGAC
GCCTGGAGCG GCCCGGTCGC CCTGACCGGA CCCACCGACG CCCGGCCGGA ACCACGCGGA
AACGGGTCCG CGGCGAAGGG ACCGGACGGC CCGATGGCGG TGGCGCCGCC GATCCCGCCG
GATCCGCGGC TTCGCGAGGC GCTGGTCATC CCGCTGGTCG TCGCGGACAA GCCCCTCGGC
GCGCTGGTCC TGGGTAACAG CACCGAGGGC GTCCCGTTCG CCGGGAACGA CCCCGAGCTG
GCCGGAGCGT TCGCGAACGA CGCCGCCCTG GCCCTCCAAC TGGCCGAGGC ACACCGCGAA
CGCGCCCGGT TCGCGGTCTT CGAGGACCGC GAGCGCATCG CCCGGGACCT GCACGATCTC
GTCATCCAAC GGCTCTTCGC GATCGGCCTG CACCTGCAGT CGCTCACGCG GGCCGTCGGT
GACGTGACCG CGGCCCGCCT GAACGCGGCC ATCACCGGAC TCGACTCCAC CATCGACGAC
ATCCGTCGCA CGATCTTCAA ACTCCAGCCG ACACCGGTAG GCGCCTGA
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| Protein sequence | MIAAVMDGGP VTSETSHADP TTRPWSRSGP GRAAAAETSA ANLLDSLSEV VFRTDAEGRW
TYLNRAWTTL TGYDVGPSLG ARFLDYVHPD EVEYTTALFM GVVHGGADHC HHETRYRTRH
GGYRQVQIRA NVLRGPSGEV LGNTGTILDV TDSRLGAEAV GEHATLLELI TAGTDPEELL
TGVAVYDRDL RLRRGSPVVD RLVGAQLLPG DPLDRLVELL HPADWQTRSL GGDWGLVALA
LRTRRAQLGD LELAGERGTG RALRASVIPF DQGGEEMAAL VLSDITDLRR AERQQAGLAR
LGQRALADLD IPTLLAEAVG LVTTTLDVAV CDVIRCEPDG DRASLADGAS LADGPERAGL
PDGSANGSST SAAGGAGGPG AGASDPGHLA RLTDPSAPTA PTQLGTGPIY LTGTLAAEAS
SLVHLALGVD EPVVANDLGT RPHLRSGWSD AGGAQAALAA RIGSARSPFG VLAAASTRPR
RFTGEESRFL QSVANILGAA IDRDRAERRS RQLYEEAQRG RAWLAASAEI TAGALVAGQS
QQAFMLLASL ARGVTSADVG AVALPDEAGN LVATEVDSAP HRHSDPEILH SLALALDAAE
NRPEFLAGRP VHVGDLDATD AWSGPVALTG PTDARPEPRG NGSAAKGPDG PMAVAPPIPP
DPRLREALVI PLVVADKPLG ALVLGNSTEG VPFAGNDPEL AGAFANDAAL ALQLAEAHRE
RARFAVFEDR ERIARDLHDL VIQRLFAIGL HLQSLTRAVG DVTAARLNAA ITGLDSTIDD
IRRTIFKLQP TPVGA
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