Gene Franean1_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4205 
Symbol 
ID5672560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5008239 
End bp5009144 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID641243078 
Productmethyltransferase type 11 
Protein accessionYP_001508495 
Protein GI158315987 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.940234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTCC GCCGGGTCGA TGGCGCCGTC CGGCCTGCGT GCCTCGAGTC TGGCCGGTAC 
GGAACTCGCC CGGCCCGAAT CGTTTGTCGC CGGAGCAACG ACGAAGGTCC CAGTCGGACG
GACGTTCGGT CCCGCCCCGC GGCACCCCCG AGCCAACCCG AGCCTTCCGC CCACCCCGCG
CGGCAGCCGG GGCCGGTGTC AAGCCCGGTC TGGGTCATGA TCGAATTCGT CGTCGTCGAT
GTCGGCGGTG GCCCGGGAAC TCACGCCGCG CACCTCGCCG AACGCGGCTA CGACGTGCTC
CTCGTCGACC CGGTCGTCCG CCACGTCGAG ATGGCGCAGG CCCGCTGTCG GTCGCAACAG
CACGCGCCGT TTCGCGTCCA GCGGGGTGAG GCCCGCAGTC TGCCGGTTGC CGATCAGACG
GCCGACGTCG TGCTGCTCAT GGGCCCGCTC TACCACCTCG TCCAGGCGGA CGAGCGGGCC
GCGGCGCTGC GCGAGGCAAG CCGTGTTCTT CGGCCGGGTG GTGCTGTCCT GGTTGAGGTC
ATCACCCGGC ACGCCTGGGT CCTGGACGCG ACGAAGAAAG GCCTGCTCGA CAGCGATGGG
GTCTGGGAGG ACTTTGACCG CAACCTACGC ACCGGCCTCA GTCAGGATCC GGGACGCCAC
ACCGACGGCG CCTTCTGGGC GTATTTCCAC AACCCTGAGG AACTGCGCGG GGAGCTGGAT
CTCGCCGGCT ACCAGGACAC CCGCCTTGTC GCCGTCGAGG GCTTCGCCTG GTTGCTGGGG
GACCTCGAGC AGCGAATGGC CGACCCCGCC GATCTCCTCC GAGTCATCCG TCTGACCGAG
ACCGAACCCT CGATGCTCGG AACGAGCGCG CACGTCATCG GCGTGGCGCG CAAGCCCAGG
TCGTAG
 
Protein sequence
MPVRRVDGAV RPACLESGRY GTRPARIVCR RSNDEGPSRT DVRSRPAAPP SQPEPSAHPA 
RQPGPVSSPV WVMIEFVVVD VGGGPGTHAA HLAERGYDVL LVDPVVRHVE MAQARCRSQQ
HAPFRVQRGE ARSLPVADQT ADVVLLMGPL YHLVQADERA AALREASRVL RPGGAVLVEV
ITRHAWVLDA TKKGLLDSDG VWEDFDRNLR TGLSQDPGRH TDGAFWAYFH NPEELRGELD
LAGYQDTRLV AVEGFAWLLG DLEQRMADPA DLLRVIRLTE TEPSMLGTSA HVIGVARKPR
S