| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4203 |
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| Symbol | |
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| ID | 5672558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5005969 |
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| End bp | 5007489 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243076 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508493 |
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| Protein GI | 158315985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.318181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.987085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAG CTCGCACGGA CCCGGCCGAA CCGGGGGCGG GCCCGGCGTC GACGGCACCG
ATGGGACCGA CCGCGCCGCG CCCGAGCCTG TTGACCGCGG CGCTGGCCGT GGCGGGCATC
GTGGCGTCGT TCATGCACAC CCTGGTCGTG CCGATCATTC CGCAGCTCCC GCACCTGTTG
GACTCCTCGG CGTCCAACAC GACCTGGGTC GTCACGATCA CCTTGCTGGC CGGTGCCGTC
GCGACGCCTG TCGCCGGGCG GCTCGGTGAC ATGTACGGCA AGCGCCGGAT CATGCTCGGC
AGCGTGGGGC TGCTCGGCGC CGGCTCGCTG GTCTGCGCGC TGAGCACGTC GTTGCCACAG
ATGGTTGTCG GCCGCGGGCT GCAGGGGCTG GCCACCGGGC TGATCCCGCT CGGGATCAGC
CTCATGCGCG ACGAGCTGCC GCCCGAGCGG CTCGGCTCCG CGCTCGGGCT GATGAGCTCC
TCGCTCGGCA TCGGTGGCGC GCTAGGTGTC CCGACCTCGG CGCTGATCGC TCAGAACTTC
AGCTGGCACG TGCTCTTCTG GACGGCCACC GTCCTGAGCG TGCTGGTGCT CGCCATGCTG
TGGCGGGTCG TCCCCGAGTC GCCGGTGCGC GACGTCCGCG GCCGCTTCGA CGTCGTCGGG
GCGCTCGGGC TCGGCACCGG GATCACCTGC CTGCTGCTGG CGATCTCCAA GGGCAGCACC
TGGGGCTGGA CGTCCATCAC CACCCTGGGG ACGGTGCTCG CCGCGCTCGC GGTGCTGGCC
CTGTGGGGCC CGTGGGAGCT GCGCCACGCC TCCCCGGTGG TCGACCTGCG GGTCAGTGCC
CGCCGTCAGG TGCTGATGAC CAACCTGACC TCGGTCGTCG TCGGCTTCGC GATGTACGGG
ATGGGGCTGG TCATCCCGCA GTTCCTGCAG CTGTCCGCGG GCACCGGCTA CGGGCTGGGC
AAGTCGATGG TCGTCGCCGG GCTGTGCTTC GCCCCGTTCG GGGTGGTCAT GATGCTCGCC
TCGCCGCTCA CCGCCCGGGT GTCGGCGATG TGGGGGTCGA AGACGACGCT GGTGCTCGGT
TCCGCGATCA TCGGGGTCAG CTACCTGATC GGCCTGTTCG TGATGCACTC GGTCTGGCAG
GTCGTGCTCC TCGCGGTGAT CGGCGGGATC GGGGTGGCGC TGGCCTACGC ATCCATGCCG
TCGCTGATCA TGGCCGCGGT GCCGGCGACC GAGACCGCGG CGGCCAACGG TCTGAACACC
CTGATGCGCT CGCTGGGCAC CTCCTCGTCG GCTGCCATCG TCGGGGTGAT GCTGGCCAAC
ATGACCATCA CGTTCGGCGG CCGGGAGGTT CCGTCGCTGG CGGGCTTCCA CGCGGTGTTC
GCGCTCGGCG CGGGCGCGGC GGCGGCCGCC GTGCTGATGG GCCTGTTCAT CCCCGGCCGG
GGGGCGCGGG AGGTGCCCGT CCCGGCTGTC GCGGCCCCGC GTGAGACGGG CCGACCGCGC
GCGCAGCTCC AGCAGAGCTG A
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| Protein sequence | MARARTDPAE PGAGPASTAP MGPTAPRPSL LTAALAVAGI VASFMHTLVV PIIPQLPHLL
DSSASNTTWV VTITLLAGAV ATPVAGRLGD MYGKRRIMLG SVGLLGAGSL VCALSTSLPQ
MVVGRGLQGL ATGLIPLGIS LMRDELPPER LGSALGLMSS SLGIGGALGV PTSALIAQNF
SWHVLFWTAT VLSVLVLAML WRVVPESPVR DVRGRFDVVG ALGLGTGITC LLLAISKGST
WGWTSITTLG TVLAALAVLA LWGPWELRHA SPVVDLRVSA RRQVLMTNLT SVVVGFAMYG
MGLVIPQFLQ LSAGTGYGLG KSMVVAGLCF APFGVVMMLA SPLTARVSAM WGSKTTLVLG
SAIIGVSYLI GLFVMHSVWQ VVLLAVIGGI GVALAYASMP SLIMAAVPAT ETAAANGLNT
LMRSLGTSSS AAIVGVMLAN MTITFGGREV PSLAGFHAVF ALGAGAAAAA VLMGLFIPGR
GAREVPVPAV AAPRETGRPR AQLQQS
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