Gene Franean1_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4134 
Symbol 
ID5672492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4916791 
End bp4917669 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID641243010 
Producthypothetical protein 
Protein accessionYP_001508427 
Protein GI158315919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.598429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCTCG CCGCCGGCGC CGTCACCGGC CTCGCCCTGC AGAACAAGAC CCTGCCCGCC 
TTCTACCTGT TCGCACTCTT GATCGGCGTC CTCGCCGGCG GGCCCCGCGA CGTGCTGCGT
TCCCGCTGGC TGGGCGCCGC CACCACGATC GCCGCCCTGG CGTGGCTACC GAACCTCCTC
TGGCAGGCGA CCCACGGCTG GCCGCAGCTC GCCCTCAGCC GCGCGATCGC CGCCGGAGCG
TCGGGGACGA GCCAGCCACG CTGGCAGTTC CTCCCGATGC AGTTCCTGCT CCTCGGCCCA
CCCCTGGCCC CGGTGTGGAT CACCGGGCTG ATCCGCCTCG CCCGCTCCCC GTGGCGGCTG
TTCTCTCTCG CCTACGCCGT GCTGGTCGTC CTGTTCCTGG CGACCGGCGG GAAGCCCTAC
TACCTGCCGA TCGTGCCGGT GTCCGTCCTG CACGACACCC CGATCGCGGC GGTGAACTAC
GACGCGGGGG AAACCGTCGG CTGGCCCGCC TTCACCGACA CCGTCGCCGC GGTGGCGCAC
GCCCAGCCGG CCGGCGCCGT CGTGGTCACC TCCAACTACG GCGAGGCCGG CGCGCTCCTA
CGTTTCCGCC CGGACGTCGG ACCCGTCCAC GCCCGACAGA ACAGCCTGTG GGATCAGGGG
CCACCCTCGG ACACCGCGAC CGCTGGTGCA CCGACTGCCA CGAAGCCGCC CGCATCGACA
ACACCGTCAA CGACGAACAG GACAGGCCGA CCCCACACCG ACGCGGCAAC ACATGCACCG
GCCACCTGGC CGCCGTGGCG AAAAATCTCC ACTCACAACG GCCAAAGAAA GACAGAAGGC
AAGGAGGTTC GCCCACTCCT CGCCACTTCT AAGATATAG
 
Protein sequence
MWLAAGAVTG LALQNKTLPA FYLFALLIGV LAGGPRDVLR SRWLGAATTI AALAWLPNLL 
WQATHGWPQL ALSRAIAAGA SGTSQPRWQF LPMQFLLLGP PLAPVWITGL IRLARSPWRL
FSLAYAVLVV LFLATGGKPY YLPIVPVSVL HDTPIAAVNY DAGETVGWPA FTDTVAAVAH
AQPAGAVVVT SNYGEAGALL RFRPDVGPVH ARQNSLWDQG PPSDTATAGA PTATKPPAST
TPSTTNRTGR PHTDAATHAP ATWPPWRKIS THNGQRKTEG KEVRPLLATS KI