Gene Franean1_4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4124 
Symbol 
ID5672482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4907098 
End bp4907844 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID641243000 
Productdienelactone hydrolase 
Protein accessionYP_001508417 
Protein GI158315909 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.232733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGT CCCGACGTGA CGTCCAGACG GCAGACGGGC TGATGGACGT CGATCTCCAT 
GCCCCCGACG GCGGCGCCCC CGCCCCGGTT GTGATCATGT ACCCGGATGC CTACGGCGTC
CGGGAGACGG TGCAGCGGAT GGCCGGGCGG CTGGCGGCGG CCGGCTACCT GGTGGCCCTG
CCGAACATGT TCTACCGCGC CGGGGCCGAC GCGGCAGCAC CGGAGAAGAT CGACTTCGCC
GACCCCGAGC AGCGCGCCCG GCTGGGGCGG GTCGTCTCCC AGGCAACCCC GCAGCGGGTG
ATGGCCGACA CCGGCGCGCT GCTGGACGCC CTGGCCGACG AGCCGGGCGC GCTGCCCGGC
CCGGTGGGGA CCATCGGCTA CTGCATCGGC GGTCGGATGG CCTTCACCGC GGCGACGGCA
CACCCCGATC GGGTCGCGGC GGCGGCGTCG ATCCACGGCG GCGGGCTGGC CAGCGACGAC
CCGTCCAGCC CGTACCTGGC GGCGGACCGC ATCCGCGCCG CCCTGTACAT CGCGATCGCC
ACCGGCGACG CCCACCACAC CGACGCCGAC CACGCCCGGC TCGTGGCGGC GCTGGACGAG
GCGAAGGTCG ACTACGAGGC GGAGATCCTC CCCGCGCGGC ACGGGTTCGC GTTGGTCGAC
TTCCCCGTGT ACGACGAGGC GGCGGCCGAG CGGCACTGGG AGAAGTCGCT GGCGCTGTTC
GCCCGCACTC TGCGTCCCGC AGCCTGA
 
Protein sequence
MAVSRRDVQT ADGLMDVDLH APDGGAPAPV VIMYPDAYGV RETVQRMAGR LAAAGYLVAL 
PNMFYRAGAD AAAPEKIDFA DPEQRARLGR VVSQATPQRV MADTGALLDA LADEPGALPG
PVGTIGYCIG GRMAFTAATA HPDRVAAAAS IHGGGLASDD PSSPYLAADR IRAALYIAIA
TGDAHHTDAD HARLVAALDE AKVDYEAEIL PARHGFALVD FPVYDEAAAE RHWEKSLALF
ARTLRPAA