| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4105 |
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| Symbol | |
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| ID | 5672463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4889959 |
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| End bp | 4890897 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242981 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001508398 |
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| Protein GI | 158315890 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAA AGAGTTTGAC AAGTAGCGTG TGTGGCATGC GCCGGACTCT GGACATCGCG
CCGCTGCGCA GCTTCGTGGC TGTCGCGGAC TGTGGCGGTT TCCAGCGGGC CGCGACGGCA
CTGCATCTCA GTCAGGCGGC GGTGAGCCAG CACGTGCGCC GCCTCGAATC CGCCACCGGA
CGGGTCCTGG TCGAGCGCCA GGGGCGTGGA TCCCAGCTCA CCCGGGACGG CGAGCAACTG
CTCGGCCAGG CCCGGCGGAT CCTGAGCCTG CACGACGAGA CCCTGCACGG CTTCGGCCTG
GAGGAGATCG AGGAGACCGT GCTCATCGGC TCGACCGAGC ACGGCGCGGC CCAGCTGTTG
CCTGTCCTCG CCACGGTTCT GGGGCAGTCA CTGCCCCACC ACCGCGTCCG GTTCCGCATC
GATCGGGGCA CCACGCTGCG CGAGGGGCTC GAGGCCGGCC GGATGGACCT GGCGTTGCTG
CTCGGCCCGG CCGACGACCC CCGCGCGCAG CCGGTCGGCG AGCTGGAGCT GACCTGGTAC
TCCGCCCCGG CCTGGCGGCG GCCGTCGGCG GCACAGCCGA TATCGGTGGT GGCCTTCGAC
CAGCCCTGCG CGCTGCGGTC CCGGGCGCTG GAGACGCTGT CGCTCCACGC GATCGAGACG
GTGATCGGCG CGGAGGCCAT GCAGCTCGCC GGCGTGCAGG CGGCGGTCGG GGCCGGCCTC
GGGATCGCGC TGCTGGCCAC GTTCGGCCAG ACCCCCGAGG GCCTCGTCTC CCGCGACGAC
CTGCCCAGGC CGGCCCCGCT GCTGCTGGCC CTCTGGGCCA GGCAGGGCCT TTCCACGAAG
ACCGCACAGC GCGTCGCGGA GGCACTGCGG CAGGTGCTCG CGCAGCTGCC GGCCGCGGAG
CGGAACACCG CGCATCTCGA ACTCGCCACC GGAGCCTGA
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| Protein sequence | MNIKSLTSSV CGMRRTLDIA PLRSFVAVAD CGGFQRAATA LHLSQAAVSQ HVRRLESATG
RVLVERQGRG SQLTRDGEQL LGQARRILSL HDETLHGFGL EEIEETVLIG STEHGAAQLL
PVLATVLGQS LPHHRVRFRI DRGTTLREGL EAGRMDLALL LGPADDPRAQ PVGELELTWY
SAPAWRRPSA AQPISVVAFD QPCALRSRAL ETLSLHAIET VIGAEAMQLA GVQAAVGAGL
GIALLATFGQ TPEGLVSRDD LPRPAPLLLA LWARQGLSTK TAQRVAEALR QVLAQLPAAE
RNTAHLELAT GA
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