Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4091 |
Symbol | |
ID | 5672449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4876169 |
End bp | 4876942 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242967 |
Product | Clp domain-containing protein |
Protein accession | YP_001508384 |
Protein GI | 158315876 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0455898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC CGAGCCCCGT CCCCATCAGC AACCCCGTCC GCCTCGACGA CCTCATCGCG GCGATCAAGA AGGCGCACTC GGACGCCCTC GACCAGCTCA CCGACGCCGT GATGGTCGCC GATCACCTCG GTGAGGTGGC CGACCACCTC ATCGGCCACT TCGTCGACCA GGCCCGCCGC TCGGGCGCGT CCTGGACGGA GATCGGCGCC AGCATGGGCG TGACGAAGCA GGCGGCCCAG AAGCGCTTCG TACCCAAGGG GCCCGGCGAG CCGTCCAGCC TCGACCCGTC ACAGGGGTTC GGCCGCTACA CCCCGCGGGC CCGCAACAGC ATCGTCGCCG CCCAGAACGA GACCCGGGCG GCGGGCAACG CCGAGATCAC CCCCGGTCAC CTGATCCTCG GCCTGCTCGC CGACCCGCAG GGCCTCGGCC CGGCCGCCAT CGCCGCCCAG GAGGTCTCCC TCGACGCCGT CCGCCAGGCG GTGACCGCGG CCCTGCCCCC GCGGGTGGAC GACCTTCCCG CTCTGATCCC GTTCGACGGG CCGTCCAAGA AGGCCCTGGA GCTCACCTTC CGGGAGGCGC TGCGGCTGGG GCACAACTAC GTCGGCACCG AACACATCCT GCTGGCGCTG CTGGAGCTGG AGGACGGCAC CGGCCCGCTC ACCGCCCTGG GTGTCGACAA GGCCACCGTC GAGACCTACC TCGCCGAGGC CCTCTCCCTG ATCACCGCCG GGCGCGCCAC CGGCGGCCAG GACTCCGGCG CGTCCCCGTC CTGA
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Protein sequence | MTNPSPVPIS NPVRLDDLIA AIKKAHSDAL DQLTDAVMVA DHLGEVADHL IGHFVDQARR SGASWTEIGA SMGVTKQAAQ KRFVPKGPGE PSSLDPSQGF GRYTPRARNS IVAAQNETRA AGNAEITPGH LILGLLADPQ GLGPAAIAAQ EVSLDAVRQA VTAALPPRVD DLPALIPFDG PSKKALELTF REALRLGHNY VGTEHILLAL LELEDGTGPL TALGVDKATV ETYLAEALSL ITAGRATGGQ DSGASPS
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