Gene Franean1_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4091 
Symbol 
ID5672449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4876169 
End bp4876942 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID641242967 
ProductClp domain-containing protein 
Protein accessionYP_001508384 
Protein GI158315876 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0455898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC CGAGCCCCGT CCCCATCAGC AACCCCGTCC GCCTCGACGA CCTCATCGCG 
GCGATCAAGA AGGCGCACTC GGACGCCCTC GACCAGCTCA CCGACGCCGT GATGGTCGCC
GATCACCTCG GTGAGGTGGC CGACCACCTC ATCGGCCACT TCGTCGACCA GGCCCGCCGC
TCGGGCGCGT CCTGGACGGA GATCGGCGCC AGCATGGGCG TGACGAAGCA GGCGGCCCAG
AAGCGCTTCG TACCCAAGGG GCCCGGCGAG CCGTCCAGCC TCGACCCGTC ACAGGGGTTC
GGCCGCTACA CCCCGCGGGC CCGCAACAGC ATCGTCGCCG CCCAGAACGA GACCCGGGCG
GCGGGCAACG CCGAGATCAC CCCCGGTCAC CTGATCCTCG GCCTGCTCGC CGACCCGCAG
GGCCTCGGCC CGGCCGCCAT CGCCGCCCAG GAGGTCTCCC TCGACGCCGT CCGCCAGGCG
GTGACCGCGG CCCTGCCCCC GCGGGTGGAC GACCTTCCCG CTCTGATCCC GTTCGACGGG
CCGTCCAAGA AGGCCCTGGA GCTCACCTTC CGGGAGGCGC TGCGGCTGGG GCACAACTAC
GTCGGCACCG AACACATCCT GCTGGCGCTG CTGGAGCTGG AGGACGGCAC CGGCCCGCTC
ACCGCCCTGG GTGTCGACAA GGCCACCGTC GAGACCTACC TCGCCGAGGC CCTCTCCCTG
ATCACCGCCG GGCGCGCCAC CGGCGGCCAG GACTCCGGCG CGTCCCCGTC CTGA
 
Protein sequence
MTNPSPVPIS NPVRLDDLIA AIKKAHSDAL DQLTDAVMVA DHLGEVADHL IGHFVDQARR 
SGASWTEIGA SMGVTKQAAQ KRFVPKGPGE PSSLDPSQGF GRYTPRARNS IVAAQNETRA
AGNAEITPGH LILGLLADPQ GLGPAAIAAQ EVSLDAVRQA VTAALPPRVD DLPALIPFDG
PSKKALELTF REALRLGHNY VGTEHILLAL LELEDGTGPL TALGVDKATV ETYLAEALSL
ITAGRATGGQ DSGASPS