Gene Franean1_4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4065 
Symbol 
ID5672423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4845957 
End bp4846388 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID641242941 
ProductNUDIX hydrolase 
Protein accessionYP_001508358 
Protein GI158315850 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCA GATACAGCAT CGAGTGTTGG ATCACTGGCC CGGACGGTGA CGTTCTCCTC 
CTACAGGTAC CTGCCCAGCC AGGCAAGCAC GAGGCGTTCT GGCAGCCGAT CACCGGCGGC
ATCGAAGCCG GGGAGACCCC CCTGCAAGCC GCTCTCCGAG AGATCCGCGA AGAAACCGGT
CTAGACCTCG ACGAGACCCG CCTCACCGAG ATCGCCACGG GCATCACGGT CGCCATCACC
CCGACGCTGA CCATCGACAA GACCCTCTAC GCCGCATCGA CACCATCCAC CGCAGTGACC
ATCAGTCCGG ACGAGCACCA GGACCACCAG TGGCTACCCG CCACCAAGGT CCCCGAGGCC
CTGTACTGGG ACAGCAACCG CGACGCCTGG AAGCTCATCA GCCAGCACCA CCGCGGCAGT
GGGCACGCCT AA
 
Protein sequence
MAIRYSIECW ITGPDGDVLL LQVPAQPGKH EAFWQPITGG IEAGETPLQA ALREIREETG 
LDLDETRLTE IATGITVAIT PTLTIDKTLY AASTPSTAVT ISPDEHQDHQ WLPATKVPEA
LYWDSNRDAW KLISQHHRGS GHA