Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4065 |
Symbol | |
ID | 5672423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4845957 |
End bp | 4846388 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641242941 |
Product | NUDIX hydrolase |
Protein accession | YP_001508358 |
Protein GI | 158315850 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGATCA GATACAGCAT CGAGTGTTGG ATCACTGGCC CGGACGGTGA CGTTCTCCTC CTACAGGTAC CTGCCCAGCC AGGCAAGCAC GAGGCGTTCT GGCAGCCGAT CACCGGCGGC ATCGAAGCCG GGGAGACCCC CCTGCAAGCC GCTCTCCGAG AGATCCGCGA AGAAACCGGT CTAGACCTCG ACGAGACCCG CCTCACCGAG ATCGCCACGG GCATCACGGT CGCCATCACC CCGACGCTGA CCATCGACAA GACCCTCTAC GCCGCATCGA CACCATCCAC CGCAGTGACC ATCAGTCCGG ACGAGCACCA GGACCACCAG TGGCTACCCG CCACCAAGGT CCCCGAGGCC CTGTACTGGG ACAGCAACCG CGACGCCTGG AAGCTCATCA GCCAGCACCA CCGCGGCAGT GGGCACGCCT AA
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Protein sequence | MAIRYSIECW ITGPDGDVLL LQVPAQPGKH EAFWQPITGG IEAGETPLQA ALREIREETG LDLDETRLTE IATGITVAIT PTLTIDKTLY AASTPSTAVT ISPDEHQDHQ WLPATKVPEA LYWDSNRDAW KLISQHHRGS GHA
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