Gene Franean1_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4033 
Symbol 
ID5672391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4808704 
End bp4809525 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content73% 
IMG OID641242909 
Productenoyl-CoA hydratase 
Protein accessionYP_001508326 
Protein GI158315818 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.67925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.459959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TGCAGACCTC CCGTCCGGAC GGCTCCCTGC AGGACGCCCC TCCCGGCGCG 
TCCGACGAGC TCGTCCTGAC CGAGCACGGC CGGGTGCTCG TCCTCACCAT GAACCGGCCG
GCGGCGCGCA ACGCCATGTC GCTGAGCCTG GCGACCGCGA TCGCGGTCGC GCTCGAGCAG
CTCGACGCCC GTGATGACCT GAGCATCGGC ATCATCACCG GCGCGAACAA GACGTTCTGC
GCCGGGATGG ACCTGAAGGG CTTCGCCCGC GGCGAGCGTC CGATCGTGCC CGGGCGCGGC
TTCGCCGGGC TGGTCCGCCA GCCTCCCCGC AAGCCGCTGA TCGCAGCGGT CGAGGGCTAC
GCGCTCGCCG GCGGGTTCGA GATCGTGCTC TCCTGCGACC TGATCGTCGC CGCGCGGGAC
GCCAAGTTCG GCCTGCCCGA GGTGAAGCGC GGCCTGGCGG CGGCGGCCGG CGGACTGCTG
CGGCTGCAGC GCCGCATCCC CTACCACCTG GCGATGGAGC TCGTCCTGAC TGGCCGGATG
TGGCCGGCGA CCGAGGCGGC CGAGGTCCAC CTCGTCAACC GGCTCACCGA GCCGGGCGCG
GCGCTCGGGG TCGCGCTCGA GCTCGCCGAG GAGATCTCCG CGAACGCGCC GCTGGCGCTC
GCGGCCTCCA AGCAGGTGCT GTCACGATCG GTCGACTGGC CGCTCGAGGA GGCGTTCGAG
CGCCAGGAGG AGTACGTCGC GGTGGTGCGC ACCTCGGCGG ATGCCAAGGA GGGTGCCGTG
GCGTTCGCCG AGAAGCGCCC GCCGCGCTGG ACCGGCCAGT AA
 
Protein sequence
MADLQTSRPD GSLQDAPPGA SDELVLTEHG RVLVLTMNRP AARNAMSLSL ATAIAVALEQ 
LDARDDLSIG IITGANKTFC AGMDLKGFAR GERPIVPGRG FAGLVRQPPR KPLIAAVEGY
ALAGGFEIVL SCDLIVAARD AKFGLPEVKR GLAAAAGGLL RLQRRIPYHL AMELVLTGRM
WPATEAAEVH LVNRLTEPGA ALGVALELAE EISANAPLAL AASKQVLSRS VDWPLEEAFE
RQEEYVAVVR TSADAKEGAV AFAEKRPPRW TGQ