| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3989 |
|---|
| Symbol | |
|---|
| ID | 5672349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4774443 |
|---|
| End bp | 4774919 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641242867 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001508284 |
|---|
| Protein GI | 158315776 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.552919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.811497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGG CTCCCGCCCG CTTGCGTAGG CTGCCGAGCT GGCTGATGAG CCAGGCTGCG
GTGCCGGCGA GTCGGCTGGT GACCGAGCGG CTGGCCGCCG CGGACGCCCG CCGCTACCAC
TACTCGTTGC TCGCGGCGCT CGATGAGTTC GGCCCGGCCA GTCAGGCGGC GCTTGGCCGT
CGCTGTGGTC TCGACCGCAG CGACGTGGTG GCGATGGTCA ACGAGCTTGT TGATCGGGAG
CTCATCGAGC GCACCCCCGA TCCCGCCGAC CGTCGACGTA ACATCATTAC GATCACCCCG
GCAGGGGTCC GGCACCTGCG ACGGCTCGAC AAGCTGCTCG CACAGATTCA GGACGAGCTA
CTCGCGCCGC TGTCGGCGAA CGAGCGCGAC CAGTTGGTAC GGTTGCTGAC CCAGCTGGTC
GATCACCACC ACCCATTCAA GGGCCGCAGC CGGGAATCGT GTGGACCGGA CCTCTGA
|
|---|
| Protein sequence | METAPARLRR LPSWLMSQAA VPASRLVTER LAAADARRYH YSLLAALDEF GPASQAALGR
RCGLDRSDVV AMVNELVDRE LIERTPDPAD RRRNIITITP AGVRHLRRLD KLLAQIQDEL
LAPLSANERD QLVRLLTQLV DHHHPFKGRS RESCGPDL
|
|---|
| |