| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3941 |
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| Symbol | |
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| ID | 5672302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4710148 |
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| End bp | 4711161 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242820 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001508237 |
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| Protein GI | 158315729 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.140438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00710998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGAGTTTC GACATCTGGT CTCTTTCCTC GCCATCGCCG AAGAAGTCCA TTTTGGCCGG
GCCGCCCGAC GACTGAACCT GACACAGCCC TCACTGAGCC AGCATCTCGC CCGTCTCGAG
CGCGAGGTCG GCGTGCAACT GGTCGCCCGC ACCTCGCGTG AGGTCCGTCT CACCCCCGCG
GGCCAGGCGT TCCGGGGTGA GGCCAAGAGA ATCCTCGAGC TGAAGCGCCG CACCCTCGAA
ATCACCCGTG ACACCGCCGC CGGCCGTGCC GGGAAAATCA ACATCGGGTT CAACCTGCCG
GCCGGGCACC GGATTCTCCC GCCCACGCTG GCCCGCCTGC ACAGCTCCCA CCCGGGCCTG
CAGCCGCGGC TGTGGGAGCG GCGTACCGGG CCGCAGATCA AGAGCCTGCT CAGCGGGGAG
CTCGACGTCG GCTTCATCTT CGGGCTGCCG CCGACCTCGA GCCTGCACTC GATGGAGGTG
CTGCGGGTCC GCATCCTGGC CGTCGTCGGC GAGCACCACG AGTGGGCCGA GCGCGACCAG
GTGCCGTTCT GCGAGCTGGA ACGGCAGGGC TGCCTGCTGT TCCACCGGGC GCAGTGCCCG
GCCCTGTACG ACACGATCTC CCGGTCGGCC GACCGGGCCC GGATCAAGCT GCGGGTCGTC
GCCGAGGTCG ACGACCCTGG GGCGAGCGCG CTGCTGGTGA CCACCCGCCC GGTGGTCGGC
TTCGCGTCCC GGGAACGCGC GCTGGGAATC GCCGGATCGC GGGCGGTTCC ACTGGTCGAC
CCCGTTCCGA CCCTGCCCGT TCATGTCGTG TGGCGCCCGC CGCGCACCCG GCTGGTCGAA
ACTCTGCTCG AGAGCCTGGA AAACGCGGCC GGCGACTGGG AATCGGCTGA GACCCCCGAG
GACAAGGTCG ATTGGGTGCG GGAGCGGGGG CGATCGAATA TCCCGATGGC CGCGCCCACG
CAGGCCCGGC AGGCAGCAGC CGCCGTTACC GTCGCAGGAA ATCGCCTGAA CTAG
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| Protein sequence | MEFRHLVSFL AIAEEVHFGR AARRLNLTQP SLSQHLARLE REVGVQLVAR TSREVRLTPA
GQAFRGEAKR ILELKRRTLE ITRDTAAGRA GKINIGFNLP AGHRILPPTL ARLHSSHPGL
QPRLWERRTG PQIKSLLSGE LDVGFIFGLP PTSSLHSMEV LRVRILAVVG EHHEWAERDQ
VPFCELERQG CLLFHRAQCP ALYDTISRSA DRARIKLRVV AEVDDPGASA LLVTTRPVVG
FASRERALGI AGSRAVPLVD PVPTLPVHVV WRPPRTRLVE TLLESLENAA GDWESAETPE
DKVDWVRERG RSNIPMAAPT QARQAAAAVT VAGNRLN
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