| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3922 |
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| Symbol | |
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| ID | 5672283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4689701 |
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| End bp | 4690654 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242801 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001508218 |
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| Protein GI | 158315710 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0207094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTCA CTGTTGCGAG ACGTGTAGGC CGTAGCCTGC TGGTGGTCTT ACTCGTGACC
ATGGGGGCCG TGGCGCTACT GAGCCTGGCT CCGGGGTCAG CGGCCTCCGT CATCCTGGGG
GAGAACGCGA CACCGGACGC CATCGCCGCT CTGAACGCCA AGCTGGGACT CGATCGGCCT
CTGTGGTCGC AGTACACGCA CTGGCTCGGC AACGCCGTCA CCGGCGACCT GGGCACCTCC
CCGGTGACCA ACCAACCCGT CCTGGACGCG ATCGTCGAGC GGCTGCCGGT CACCCTGCAG
CTCGCCGCGA TGGCTCTGGT CTTCGCGCTG CTTGTCGCCG TGCTGCTGGC GGTGGTGTCC
GCGAGCTGGC CGGGCACTCC GATCGACCGG GCGATCACCG CGCTGTCCTC GGTGTTCCTC
TCCGTACCCG CCTTCATCGC GGGCCCGGTC ATGATCTACT TCTTCGCGCT GCAGGCCGGG
TGGTTCCCGG TGACGGGCTG GTCGCGCATC AGCGAGGGCC TCGGAGACAA CCTCCGCAGC
GCCATCCTGC CCGTCCTCGC GATCTCCCTG ACCGAGATCG CGTCCTTCCA CCGGCTGCTG
CGCACCGACC TGGTCGGCAC GCTGCGTGAG GACTTCATCG GGGCGGCCCG CGCCAAGGGC
ATGAGCCCGT CCTACGTGAT GTCCCGTCAC GCCCTGCGGC CGTCGTCGTT CTCCCTGGTC
ACCCTCGTGG GCATCAACCT GGGCCGGCTG ATCGGCGGAA CGGTGATCGT GGAATCCCTG
TTCTCGCTGC CGGGCCTGGG CCAGCTCGTC GTCTACTCGA TCACTGCCCG CGACATCATC
ACCGTCCAGG GCATCGTCGT GTTCATCGCC GTGGTCTACG TGGTCATCAA CATGCTCGTG
GATCTCAGTT ACGGCTGGCT CGACCCGCGC GTCAGGAAGG CTGCCAACGC ATGA
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| Protein sequence | MLLTVARRVG RSLLVVLLVT MGAVALLSLA PGSAASVILG ENATPDAIAA LNAKLGLDRP
LWSQYTHWLG NAVTGDLGTS PVTNQPVLDA IVERLPVTLQ LAAMALVFAL LVAVLLAVVS
ASWPGTPIDR AITALSSVFL SVPAFIAGPV MIYFFALQAG WFPVTGWSRI SEGLGDNLRS
AILPVLAISL TEIASFHRLL RTDLVGTLRE DFIGAARAKG MSPSYVMSRH ALRPSSFSLV
TLVGINLGRL IGGTVIVESL FSLPGLGQLV VYSITARDII TVQGIVVFIA VVYVVINMLV
DLSYGWLDPR VRKAANA
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