Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3897 |
Symbol | |
ID | 5672258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4661741 |
End bp | 4662148 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641242776 |
Product | hypothetical protein |
Protein accession | YP_001508193 |
Protein GI | 158315685 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0910689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGCCC GGCAACACCT GACCATCCGG CGGCTCTCCC AGCACAACCG CGGCAGCGCG GCGCCGCCGG GCCCCCGACC GGGGGAATCC TGTGGCCAAG CGGCTTTTAT CTCCGGCATC ATGCCGGCCA TGAGCCTGTG GGATGTGCCG CCGATGGATA TTCGACCGCA CCTGCGGGCG GAGCGGGTTG CGCTTCTGGA GTTGCTGGAG GGCCTGGCGC CGGACCAGTG GAACGCGCCG ACGGTCTGCC CCGGCTGGTC GGTCAAGGAC GTCGCCTTGC ACCTGGTGGA CGACGATCTC GGCTGGCTTT CTCGCGGACG TGATCAGGAC CTCTCCGGCC TGCTGGCCGG CACTCCGACT ACCGGGAGTT CGTGGCCGCG CTGCATGCCA AGAACGACGG CTGGGTGA
|
Protein sequence | MPARQHLTIR RLSQHNRGSA APPGPRPGES CGQAAFISGI MPAMSLWDVP PMDIRPHLRA ERVALLELLE GLAPDQWNAP TVCPGWSVKD VALHLVDDDL GWLSRGRDQD LSGLLAGTPT TGSSWPRCMP RTTAG
|
| |