Gene Franean1_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3897 
Symbol 
ID5672258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4661741 
End bp4662148 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID641242776 
Producthypothetical protein 
Protein accessionYP_001508193 
Protein GI158315685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0910689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCC GGCAACACCT GACCATCCGG CGGCTCTCCC AGCACAACCG CGGCAGCGCG 
GCGCCGCCGG GCCCCCGACC GGGGGAATCC TGTGGCCAAG CGGCTTTTAT CTCCGGCATC
ATGCCGGCCA TGAGCCTGTG GGATGTGCCG CCGATGGATA TTCGACCGCA CCTGCGGGCG
GAGCGGGTTG CGCTTCTGGA GTTGCTGGAG GGCCTGGCGC CGGACCAGTG GAACGCGCCG
ACGGTCTGCC CCGGCTGGTC GGTCAAGGAC GTCGCCTTGC ACCTGGTGGA CGACGATCTC
GGCTGGCTTT CTCGCGGACG TGATCAGGAC CTCTCCGGCC TGCTGGCCGG CACTCCGACT
ACCGGGAGTT CGTGGCCGCG CTGCATGCCA AGAACGACGG CTGGGTGA
 
Protein sequence
MPARQHLTIR RLSQHNRGSA APPGPRPGES CGQAAFISGI MPAMSLWDVP PMDIRPHLRA 
ERVALLELLE GLAPDQWNAP TVCPGWSVKD VALHLVDDDL GWLSRGRDQD LSGLLAGTPT
TGSSWPRCMP RTTAG