| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3883 |
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| Symbol | |
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| ID | 5675724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4619152 |
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| End bp | 4620480 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242763 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001508180 |
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| Protein GI | 158315672 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.385825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00073239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGACGCGT GGGAAACATG CTGGCGAGTG CCGCGTGGGG AGGTGCACGT GACCGACGCC
TATGGTCGCG GCGGCGCCAC ACCGCCGTCC CGGTGGGATC CGGTCGAACC GGACCCGGTG
GCCGGGCTAC TCGCCACCGC CCGTCGCCGC CTGGGCATGG ATCTCTGTTG GTTCTCCAGG
CTGATCGGGG GAGCCCAGGT GATCGAGGCG TGCGACGGCG ACGCCGCGGC CTTCGGTGTC
CACCCCGGCT CGACGGTGCA CGATCCCGGC CCGCACCGCT CGAATGCTCT AGCCGAACGT
GCTCTAGCCG AACGCCCGCC TCCGGTCGTC CGCAGGATCC GCCCGGAGGC GGTGACGTCC
GAGGCAGCGG GGCCGGCGAT GACCGGGGGG CCGCTGGCCG ACCGGCCCGA GATCGGCTCG
TACATCGGAG TTCCGGTGAC CCTGGCGGAC GGCCGTCCGT ACGGGATGTT GTGCTGCCTG
AGCCGCGACG CCGACGTGGC GACGCCCGGC CGCAAGGCGC GTTCGCTGGC CCTGCTGGCG
GAGGTGCTGT CCGCCTCGAT CTCCGACCGG CGGTCCGGCG GGGAGGACCG GGAGGCGGCG
TGGTGGCGGA TCTGGCGGCT GATCGAAAGC GGCGGCCCGA CGATGGTCTT CCAGCCGGTC
TTCGACCTGC CGTCGCTCGA CTGCGTGGGG GCTGAGGCGC TTGCCCGGTT CCCGCCCGGT
TCGGGTGGTG CCGAGCGCTG GTTCGCCGAC GCCGCCGCCG TGGGTCTCGG CCCCGCACTC
GAACTGTCCG CGATCCGGTC GGCGCTGCGC GCGTTCACCC GCCTGCCGCC TGAATTCGGG
CTCGGGGTCA ACGCCTCACC GGCCACGATC CTCTCGGGGC GGCTGGCGGA TGCGATCGCC
GATATCCCGG CCGACCGACT CGTTGTCGAG GTCACCGAGG GTGACAAGGT CGAGGATTAT
CTGTCGGTCC GCTGCGCGCT GGGCGTCCTG CGCCGTGAAG GAGTCCGGAT CGCCGTGGAC
GACGTCGGTG CCGGCTACGC CAGCCTGCAT CATCTTGTGC AGCTCCAGCC CGACTTCATC
AAGATGGATC AGTGTCTCAC CCGGCGGATC GACGCTGATC CGGCGCGGCG CGCGCTCGCC
GCCGCGCTGG TGCACTTCGC CCAGGAGACA GGCAGCCTGG TCCTCGCCGA GGGGGTCGAG
ACCGCGCGGG AGCTCGGTGT CCTGATCGGC ACGGGCGTGC ACCAGGCGCA GGGCCACTAC
CTCGCCCCAC CCGGTCCGCT GCCACTGCCC GCGAGCGCCA ACCGGACCCG CCCGCCCGAT
ACGGCTTAG
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| Protein sequence | MDAWETCWRV PRGEVHVTDA YGRGGATPPS RWDPVEPDPV AGLLATARRR LGMDLCWFSR
LIGGAQVIEA CDGDAAAFGV HPGSTVHDPG PHRSNALAER ALAERPPPVV RRIRPEAVTS
EAAGPAMTGG PLADRPEIGS YIGVPVTLAD GRPYGMLCCL SRDADVATPG RKARSLALLA
EVLSASISDR RSGGEDREAA WWRIWRLIES GGPTMVFQPV FDLPSLDCVG AEALARFPPG
SGGAERWFAD AAAVGLGPAL ELSAIRSALR AFTRLPPEFG LGVNASPATI LSGRLADAIA
DIPADRLVVE VTEGDKVEDY LSVRCALGVL RREGVRIAVD DVGAGYASLH HLVQLQPDFI
KMDQCLTRRI DADPARRALA AALVHFAQET GSLVLAEGVE TARELGVLIG TGVHQAQGHY
LAPPGPLPLP ASANRTRPPD TA
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