| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3880 |
|---|
| Symbol | |
|---|
| ID | 5672243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4612043 |
|---|
| End bp | 4612504 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641242758 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001508178 |
|---|
| Protein GI | 158315670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00585365 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGACG AACCGGAGCC GCCCGCCAGG ACTCGCCCCA CCTACCTCCA GGACGAGCGG
GAGCTGCTCG ATGGCTGGCT CGAGTTCCAC CGGTCGACCC TGTTGGCGAA GTGCGACGGG
CTGAGCGACG ACCTGCGCGG AGCCAGGCCG GTGGCCACGT CGCTGCTGTC CCTGCACGGC
CTGGTCCGTC ACCTGGCGGA GACCGAGCGA AACTGGTTCA GCCGGATCCT GGAGGCGAAG
CCCGACCTGG GACGGATCTG GTACGACCCG GCGGTCGAGG GCAGTCCGCT GGTCCCCCTC
GAGCACACGA GCTGGGAGGA GGACCTCGCC ACCTACCAGG AGCAGTGCGA ACACAGCCGC
CGGGTGGCCG CGGTCAGGTC CTTCGACGAC TGCGGCGTGT GGCGAGGCAA GCAGGTCTCG
ATGAGGTCGG TCTACCTGCA CATGATCCAG GAGTACGCCT GA
|
|---|
| Protein sequence | MADEPEPPAR TRPTYLQDER ELLDGWLEFH RSTLLAKCDG LSDDLRGARP VATSLLSLHG
LVRHLAETER NWFSRILEAK PDLGRIWYDP AVEGSPLVPL EHTSWEEDLA TYQEQCEHSR
RVAAVRSFDD CGVWRGKQVS MRSVYLHMIQ EYA
|
|---|
| |