| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3821 |
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| Symbol | |
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| ID | 5672185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4539371 |
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| End bp | 4540060 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242700 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001508120 |
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| Protein GI | 158315612 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.018492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0696013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCG GGAACGAGAG CTTCACCAAG GCACGGCTGT GCGAGCAGCA GCACCCCAGC
AAGGCCGTGG TCTTCCACTT CAACCCGTCG ACCATCAAGA TCGGCAAGAA GGCGGAGTAC
AAGGAGCACC CCACTCAGGC GGCCAAGGAC GCGTCCCGCC CGGCCTTCCT CGGCGCCCGC
GCCGTGGACC TGCAGTTCAG CCTGCTGCTC GACTCGGGGG GCCAGGGCGG AAGGACCGTG
ATGACCGAGA TCCAGCAGCT GCTCAACTGG ACGAACCCCA CCGAGCGCTC CCGGCGCGGG
ACGTCGCCCA GCCCGCCGGT GCTGATGTTC AACTGGGGTG ACTTCAAGGT CGGCCAGACC
GGGCAGTTCG TCGGCCTTCT CACCAGCGTC GACGCCACCT GCACGCTGTT CACGCCCACC
GGTGCGCCCA CCCGCGCCGA GGTCTCGCTG GCGATGAAGG CGGCTCCCGA GCCGGCCAAG
GGGACGAACC CGACCTCCGG TGGGATCAGC GCCCGGCAGG CCCACCAGGT CATCGCCGGC
GACACGCTGG CCGCCATTGC GCACAACACA TACGGCGACC CCGGCTGCTG GCGGGCGCTC
GCCGAGCTCA ACGGCATCGA CGACCCGATG CGGCTGCCGG TCGGCACCCG GCTGCTGCTG
CCGGACCGGG CCGACCTCGG GCGCGGCTGA
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| Protein sequence | MSPGNESFTK ARLCEQQHPS KAVVFHFNPS TIKIGKKAEY KEHPTQAAKD ASRPAFLGAR
AVDLQFSLLL DSGGQGGRTV MTEIQQLLNW TNPTERSRRG TSPSPPVLMF NWGDFKVGQT
GQFVGLLTSV DATCTLFTPT GAPTRAEVSL AMKAAPEPAK GTNPTSGGIS ARQAHQVIAG
DTLAAIAHNT YGDPGCWRAL AELNGIDDPM RLPVGTRLLL PDRADLGRG
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