Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3810 |
Symbol | |
ID | 5672174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4525087 |
End bp | 4525767 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242689 |
Product | hypothetical protein |
Protein accession | YP_001508109 |
Protein GI | 158315601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.215522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCGT TCAGAGCAAT GATCCATGAC GTGGACGCGA CGCTGTCCGC ACTGTTGAGC GCCGAGGGTG TCGCGAGCGA CGACATGGAG GTGCTCTTCG ACGCGCCCAC CCGGGAGTGG GCGGCCCGGC GCAGCGGGCC GTGCATCGAC GCGTTCCTCT ACGACATCCG GGAGGACGTC GCCCGGCGCG AGATCGCGAT GGAAGCGGTC CACGACGCCG ACGGCAAGAT AGTCTCCCGC CGGCCACCAG CGCGCCGGCT CCGGCTGTCC TACCTGCTCA CCGCCTGGAC CACCCGGCCG GAGGACGAGC ACCGACTGCT GTCGGCCTTG CTGTCGGCCT TGCTGCGGTA TGACGCGGTC CCCCGGGAGC ACCTCCGCGG TGCGCTGGCC AACCAGCCCA TCCCCGTGCT GTTGCAGTTG GCCCTGCCGA CCGGGGGCGA CCGCAGCATC ACGGACGTGT GGAACGCGCT CGGTGGCGAG CTCAAGCCGT CGCTGGACCT CGTCGTGGTG GCGCCGTTCG ACCCGGCCCG GGTAGAGCCG GTGGGACCGC TGGTGGCGGC GGATCCGCAG CTGCACGTGC GGAGCTCCGC CGTCGACCGC CGCCGGGCGG AGGAAGACGG GGGATCGTCA GGAGGGCCGC CGGACCGGCA CGCCCCACGC CGCCGCATCC AGGAGATCTG A
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Protein sequence | MRPFRAMIHD VDATLSALLS AEGVASDDME VLFDAPTREW AARRSGPCID AFLYDIREDV ARREIAMEAV HDADGKIVSR RPPARRLRLS YLLTAWTTRP EDEHRLLSAL LSALLRYDAV PREHLRGALA NQPIPVLLQL ALPTGGDRSI TDVWNALGGE LKPSLDLVVV APFDPARVEP VGPLVAADPQ LHVRSSAVDR RRAEEDGGSS GGPPDRHAPR RRIQEI
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