Gene Franean1_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3810 
Symbol 
ID5672174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4525087 
End bp4525767 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID641242689 
Producthypothetical protein 
Protein accessionYP_001508109 
Protein GI158315601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.173804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.215522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCGT TCAGAGCAAT GATCCATGAC GTGGACGCGA CGCTGTCCGC ACTGTTGAGC 
GCCGAGGGTG TCGCGAGCGA CGACATGGAG GTGCTCTTCG ACGCGCCCAC CCGGGAGTGG
GCGGCCCGGC GCAGCGGGCC GTGCATCGAC GCGTTCCTCT ACGACATCCG GGAGGACGTC
GCCCGGCGCG AGATCGCGAT GGAAGCGGTC CACGACGCCG ACGGCAAGAT AGTCTCCCGC
CGGCCACCAG CGCGCCGGCT CCGGCTGTCC TACCTGCTCA CCGCCTGGAC CACCCGGCCG
GAGGACGAGC ACCGACTGCT GTCGGCCTTG CTGTCGGCCT TGCTGCGGTA TGACGCGGTC
CCCCGGGAGC ACCTCCGCGG TGCGCTGGCC AACCAGCCCA TCCCCGTGCT GTTGCAGTTG
GCCCTGCCGA CCGGGGGCGA CCGCAGCATC ACGGACGTGT GGAACGCGCT CGGTGGCGAG
CTCAAGCCGT CGCTGGACCT CGTCGTGGTG GCGCCGTTCG ACCCGGCCCG GGTAGAGCCG
GTGGGACCGC TGGTGGCGGC GGATCCGCAG CTGCACGTGC GGAGCTCCGC CGTCGACCGC
CGCCGGGCGG AGGAAGACGG GGGATCGTCA GGAGGGCCGC CGGACCGGCA CGCCCCACGC
CGCCGCATCC AGGAGATCTG A
 
Protein sequence
MRPFRAMIHD VDATLSALLS AEGVASDDME VLFDAPTREW AARRSGPCID AFLYDIREDV 
ARREIAMEAV HDADGKIVSR RPPARRLRLS YLLTAWTTRP EDEHRLLSAL LSALLRYDAV
PREHLRGALA NQPIPVLLQL ALPTGGDRSI TDVWNALGGE LKPSLDLVVV APFDPARVEP
VGPLVAADPQ LHVRSSAVDR RRAEEDGGSS GGPPDRHAPR RRIQEI