| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3801 |
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| Symbol | |
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| ID | 5672165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4509500 |
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| End bp | 4510954 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242680 |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_001508100 |
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| Protein GI | 158315592 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00993794 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.608011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGG TTCTCGTCCT GCGGGACACG CGGTTGCAGG TCCGTCCCGG GGACACCGCC
CGGACCAGCG CGACCGTGCG CAACGCCGGT GATCTCGTCG AGCAGTACGC CCTCGACGTG
CTCGGACCGG CCGCCGCCTG GGCGGAGGTC ATCCCTCCCA CCATCTCGGT GGTCCGCCGC
GGGGAGAGCA CCGTCCAGAT CCTGTTCCGG CCGCCGGTGG GGCCGACGAC CCCGGCGGGC
ACCGTGCCGT TCGCGCTGCG CTGCGTCTCC CGGGAGAACC CGGACAGCGT CGCGATCGCC
GAGGGGGACC TCGCCGTCGG GGCGATCCAC GAGATCGTCG CGTCGGTCAC CCCGGCGGTG
TCCCGCGGCC GGTGGTCCGG CCGGTGGACC GCGCGCTTCG AGAACCGCGG CACAGCACCG
GCCCGGCTGC GGCTGTCCGC CTCCGACGAA CGCCGGACGC TCGGTTTCGC GCTCGCCCCG
GTGGAGCTGG AGATCCCCCC GGGCGAATCC GGTTACGCCT TCCTGAAGGC GCGAGCCGCC
AAGCCGGCGC TGCTCGGTGC GCTGACCCGG CAGCAGGTGC GGCTGACCTA CACCCGGGAG
ACCGCGCCCG ACGAGCCGGT CGCCGAGGGT TTCGTGGATG TCTCCTTCGA ACACGTCCCG
GTGCTGTCCC GGGCGATGAC GACGATCGCC GGCCTCGCCC TCGTGGGCGG AGCCGCCGCC
GTAGTCCTGC TGAGCCAGTC GAGCCCGAAG GACGACACGG CGGCGCCGGG GGCCGCACCA
CCGGCACCGA CCACCTTCTC CGCGGAGACC GGTGACGGCG GTGTCGTCCG CCTGAGCTGG
TCGACGGTCC CCGGGGCGAA GGAGTACGGA ATCCAGAAGC TGGTCGGGGA CGAGGACGTC
GCGCTCGACA CCAAGAGGGT CGACGGGCAG CTGAACGCCT ACGACTTCAC GGGGCTCAAG
GGCGGCGAGC GGACCTGCTT CCGACTGGTG GCGTTCAACG ACTCCGGGGC TTCGCAGCCG
TCCCCGCACG CCTGCGCCAC CGCCGGGATC ACCCCGGAGC CGAGTCCCGG GCCCACGCCG
ACCGGACCCA CCCCGACCGG ACCAACGCCC ACGTCCCCCA CACCCACGCC CGAGACGCCG
AACCCGCAGC CCGGTCCCGG CACGCGGGAG CCGCGGGACG CCTACGTCGT CCTCAGTGTG
TTCGCCAAGG ACGACCAGGT CGCGAACGAC GCGCAGAAAC CTGCACAACG TGCCGGCGAG
ATCGGCTCGG CGCTCGGCGT CGACGTCGTC CTCGCCGACG CCGACAAGTC GACCCGGCTC
TCCGCCCAGT ACCCGGGCTT CCTCGTGATC TACGCGGACC GCTTCGTCAC GCCCGAGGAC
GCCGGGAAGT TCTGCACCGA CATGAGCGAC AAGCTCAGCA CCGTGAAGGC CATCTGCGTG
GCGCAGAACA ACTGA
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| Protein sequence | MDPVLVLRDT RLQVRPGDTA RTSATVRNAG DLVEQYALDV LGPAAAWAEV IPPTISVVRR
GESTVQILFR PPVGPTTPAG TVPFALRCVS RENPDSVAIA EGDLAVGAIH EIVASVTPAV
SRGRWSGRWT ARFENRGTAP ARLRLSASDE RRTLGFALAP VELEIPPGES GYAFLKARAA
KPALLGALTR QQVRLTYTRE TAPDEPVAEG FVDVSFEHVP VLSRAMTTIA GLALVGGAAA
VVLLSQSSPK DDTAAPGAAP PAPTTFSAET GDGGVVRLSW STVPGAKEYG IQKLVGDEDV
ALDTKRVDGQ LNAYDFTGLK GGERTCFRLV AFNDSGASQP SPHACATAGI TPEPSPGPTP
TGPTPTGPTP TSPTPTPETP NPQPGPGTRE PRDAYVVLSV FAKDDQVAND AQKPAQRAGE
IGSALGVDVV LADADKSTRL SAQYPGFLVI YADRFVTPED AGKFCTDMSD KLSTVKAICV
AQNN
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