| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3764 |
|---|
| Symbol | |
|---|
| ID | 5672129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4462359 |
|---|
| End bp | 4463504 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641242645 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001508065 |
|---|
| Protein GI | 158315557 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.269499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCG TTGCAGTCAA CGACACCGCC GCCACGGCCA CGGCCGTGGG GGAGGCGCGC
CGGCTCCGGC TCGGCTTCAA CTCCCGCATC GCCTTCCCCG CCGGGCACGC CGCCGAAGGG
CTGCGGGACG GCATCGAGCT GTTCCGGGTG GCCGAGCAGC TCGGCTACGA CACCGGCTGG
GTCTACCAGC GTCACTTCGA CAACTACCTC GCGTCGCCGC TGGTGTTCCA CGCGGCTGCC
GCGCAGCACA CCGAGCGCAT CGGCCTCGGC ACCGCCATCA TCGGCGCCCG CTACGAGGAT
CCCGTGCTGC TCGCCGAGGC CGCCGGCACG GCCGACCTGC TCAGCGGCGG ACGTCTGCAG
CTCGGCCTCG GCACCGGCCA GGGCGGCTAC GACCACATCT TCGGCCAGGA GCCGAACGAC
GGGCGGGACC AGTCCCAGGC CCGGCTTGCC ACGTTCCTGC GTGGCATCCG CGGCGAGAAG
CTGGGCGAGG TGACCGACCC CGCCGGGCTC GTCGCCGCGG GCACCGAGCT GTTCGTCCGC
CCGACCAGCC CCACGCTGCC GGACCGGGTC TGGTACGGCG GCGGCTCGGT GGCCTCCGCC
GAACGGGTCG GCCGCCAGGG GCTGCGACTG CTGCTCAGTA CCATCCTCAG CGGCCAGATC
GACGACTACG GCGCCGAACT GGCCCGCGCC GTCGAGGCCT ACCGCGTCGC CTACACCGGA
ACCTCGCCCT CGCGTGTCGC CATCGCACGC TCCGTGCTGC CCGCCACGTC GCCGGAGCAC
GCCCGCGTCT ACGCGGCCTA CGACGAACAG CGGCGCACCC ACGGGCCGGC GGCCTCGCGC
CCGGAGGGCG CCCTGACCCC CGCGGCGGCC CCGCCCGCCC GGTTCACGAT GAGTCCCGTG
CACCACGGCG CCCCGTCCGC CATCGTCGAC CAGCTGCTCG CCGACCCGAG CCTGGCGGTC
AGCGACGAGC TCATCGCGTT CCTGCCGCCC GCCTTCGGGC TGCGCGACAA CCTGCGCCTG
CTCGAGGACA TCGCCGAAAC CGTCGCACCC CACCTCGGCT GGGCGCCGCC GCCGGCCGAA
GGAGATCATC CAGCAGCTCG CTCAGGACTT CGTGTCGGTC AGCAGAGCGG AGATCTCGGT
CGGTAG
|
|---|
| Protein sequence | MTTVAVNDTA ATATAVGEAR RLRLGFNSRI AFPAGHAAEG LRDGIELFRV AEQLGYDTGW
VYQRHFDNYL ASPLVFHAAA AQHTERIGLG TAIIGARYED PVLLAEAAGT ADLLSGGRLQ
LGLGTGQGGY DHIFGQEPND GRDQSQARLA TFLRGIRGEK LGEVTDPAGL VAAGTELFVR
PTSPTLPDRV WYGGGSVASA ERVGRQGLRL LLSTILSGQI DDYGAELARA VEAYRVAYTG
TSPSRVAIAR SVLPATSPEH ARVYAAYDEQ RRTHGPAASR PEGALTPAAA PPARFTMSPV
HHGAPSAIVD QLLADPSLAV SDELIAFLPP AFGLRDNLRL LEDIAETVAP HLGWAPPPAE
GDHPAARSGL RVGQQSGDLG R
|
|---|
| |