| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3682 |
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| Symbol | |
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| ID | 5672048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4359147 |
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| End bp | 4360769 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242565 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001507985 |
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| Protein GI | 158315477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0191871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCA GGGCGGGTGG CGAGCGTTCG CGGGCCGGGC GCCCGACGGC GACGGAGGCA
GCCAGGCTGA CCGAGCGGCT CCGGCGGGCC GCCGTCGACA CGTTCCTGGA GTCGGGTTAC
GACGGCACCA CGATGGAGGC CGTCGCGCAG GCCGCGGGGA TCACCAAGAG CACCTTGTAT
GCCCGCTATC CCGACAAGCG AACTCTGTTC ATCGCGGTGA GCTCGTGGGC GCTCACCCGC
CAGGAGCGCG ACGAGCGCGT CCTCGAACCG CTGCCCGACG ACCTCGCCGA GAGCCTGACC
GTGATCGCGC GGGCGATCCT GGCCCGCTCG GTCGACCCCG ACATCGTCCG CCTGAGCCGG
ATGGCGATCG CCGAGTCGGC GCGCTTCCCC GAGTTCGCGG CGAGCTCGCA GGCCGTCACC
TGGTCACCGC GGGTGCAACT GATCATTGAT CTGCTACGCA GGCACGAGAG CGCGGGCACC
GTGGTCGTCG GGGACGTCGA CCTCGCCGCC GAGCAGTTCT TCGCCATGGT CGGCGCGATG
CCGGCGTGGC TGGCCGCCTA CGGCATCTAC CGGACCCCCG AGGTCGAGGA GGAGCACCTC
CACCACGCGG TGAGCCTCTT CCTCAACGGC GTCCTGGCCA GGCCGGAGAC CATGCCGGCC
CCGCACCCGA CCGAGGCCGC CAGGCCCGCC GGGGAGGGAC CGGCCGTCCC TCGTGCGAGC
TGGCCGATGG AGTACCGGCG GCTCGGCCGC AGCGGGCTGA ACGTCTCGCG GCTCGCGCTG
GGAGTCGCGG CTCTCGGCGC CGGGCCCGCG GACCATGACG AGCGGGCCGC GATCGGCGTC
ATCCACCGCT TCCTCGACGC CGGCGGCAAC CTCCTCGACA CCACCGCCGC GGGCGACATC
GGCCGGGGTG GCACGGACCC GGACGGCGCC GCGGCGGAGC TCTGCGGCCG TGCCGTTCGG
GACAGGCGCT CGAGCGTCGT CCTGGCCTCG AGCGTCGGGC GGCCGAGCGG GCAGGGCCCC
CACGACGGCG GGAACAGCCG CCGTCACATC CGGGCCGCCT GCGAGGCGAC CCTCCGCCGG
CTCCGGACGG ACTATCTCGA CCTCCTCCAA CTCGACGCCG ACGACCCGAC GACCCCGCTG
GAGGAGACGA TCGACGCGCT GGACGACCTG GTGCGCGCCG GGAAGGTCCT CTACGTCGGC
GTCGCCAACC TGCACGTCTA CCGGGTGACG AAGGCGCTGT CGGTCAGCGA CCGGCTCGGC
CGGGCCCGTT TCATCTCGTT CCGCGGCCCG TACGGCCTGC TCTCGCGGGA GCTCGAACAC
GAGCACCTCC CGCTGCTGGC GGAGGAAGGC CTCGGCCTGA TCAGCACGAG CTCACTCCGC
TCCCCCGGGC ACGGGCACGG GCACGGGCAC GCCACTGTCG CCGCCACGGA GGCCGCGGCG
GCGGAGCTCG GGTGCACGAC CACGCAGCTG TCGCTGGCCT GGCAACTGAC GAGATCCGTC
ACCTCGATCA CGCTCGACGT CGCCTCCGCG GCCCAGCTGG ACGAGCACCT CGCGGCCCTG
GGCATCGAGA TCCCCACCGA GATCGCGGCA GCACTGGAAC AGGTCTCCCG TCCCCAGGGG
TAA
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| Protein sequence | MESRAGGERS RAGRPTATEA ARLTERLRRA AVDTFLESGY DGTTMEAVAQ AAGITKSTLY
ARYPDKRTLF IAVSSWALTR QERDERVLEP LPDDLAESLT VIARAILARS VDPDIVRLSR
MAIAESARFP EFAASSQAVT WSPRVQLIID LLRRHESAGT VVVGDVDLAA EQFFAMVGAM
PAWLAAYGIY RTPEVEEEHL HHAVSLFLNG VLARPETMPA PHPTEAARPA GEGPAVPRAS
WPMEYRRLGR SGLNVSRLAL GVAALGAGPA DHDERAAIGV IHRFLDAGGN LLDTTAAGDI
GRGGTDPDGA AAELCGRAVR DRRSSVVLAS SVGRPSGQGP HDGGNSRRHI RAACEATLRR
LRTDYLDLLQ LDADDPTTPL EETIDALDDL VRAGKVLYVG VANLHVYRVT KALSVSDRLG
RARFISFRGP YGLLSRELEH EHLPLLAEEG LGLISTSSLR SPGHGHGHGH ATVAATEAAA
AELGCTTTQL SLAWQLTRSV TSITLDVASA AQLDEHLAAL GIEIPTEIAA ALEQVSRPQG
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