Gene Franean1_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3669 
Symbol 
ID5672035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4345386 
End bp4346009 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content75% 
IMG OID641242552 
Productflavin reductase domain-containing protein 
Protein accessionYP_001507972 
Protein GI158315464 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC AGGTCTCCGC GCAGCACCCG ACGCCGCGCC GGTCACCGGC CCGCAGTGTC 
GCCGACCCGG GCGCGCTCGC GCGTGCCTTC CGGCGTCATG CCGCCGGCGT GACGATCGTG
ACGATGGCGG GACCATGCGG TCCGGTGGGG TTCACAGCGA CGTCTGTCGC CTCACTGTCC
GAGCGTCCAC CGCTGGTGTC GCTGGCGTTG TCCGTGCGGT CGTCCATCGC GCCCGTGCTC
GAGGCCAGCG AGACGCTCAT GGTCCACATG CTGTCGGAGG GGCAGAATGA GCTGGCGGCC
CGGTTCGCGC AGCCGGGCGC CGACCGGTTC GGCCCGCCGA CGCGGTGGCG GGCGCTCCCC
GGCGGCGAGC CGCTGCTGCT CGACGCCGCG GTCTGGCTGC TGTGCCGCAT CCGGCGCCGC
ACCGTCGAGG GCGACCATCA TCTCGTCGTC GCCGAGGTGC TCGACAGCCA GACCGGCCGG
GCCGAGGCCC CGCTGGTCTA CCACGACGGC GCCTACGGCA CCGTCCAGAC GGCGTCGGCG
GGTGGCGCGG GCCCTCGACC GGGTGCCGGA GAGCCGGATG GGACGATCGG CGACGGCGAT
CTGAGTATCC GCGGCGCGCG CTGA
 
Protein sequence
MPKQVSAQHP TPRRSPARSV ADPGALARAF RRHAAGVTIV TMAGPCGPVG FTATSVASLS 
ERPPLVSLAL SVRSSIAPVL EASETLMVHM LSEGQNELAA RFAQPGADRF GPPTRWRALP
GGEPLLLDAA VWLLCRIRRR TVEGDHHLVV AEVLDSQTGR AEAPLVYHDG AYGTVQTASA
GGAGPRPGAG EPDGTIGDGD LSIRGAR