Gene Franean1_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3652 
Symbol 
ID5672019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4329034 
End bp4329600 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID641242536 
Productregulatory protein TetR 
Protein accessionYP_001507956 
Protein GI158315448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGAT GGGAGCCGAA CGCGAGAGGC CGGCTCAGCG AGGCGGCGAT GGAGCTCTAC 
GTCGAGCGCG GCTTCGAGCA GACGACCGTC GCCGAGATCG CCCAGCGGGC GGGGCTCACG
GCCCGGACGT TCTTCCGCTA CTTCGCAGAC AAGCGCGAGG TGCTCTTCGC CGGCTCGACC
ATCCTGGAGG AGCACCTGAT CGCCGCGCTC GAGAGCACCC CCGCCTCCGC GTCGCCGATG
GAGGCCGTCG CGGCCGCCCT CGACGCGGCG GCGACGATGC TCGGCCAGCG GCGCGAGTTC
TCCCGGCGGC GCCAGTCCGT CATCGCCGCC AACGCGGAGC TGCGTGAACG CGAACTGATC
AAAATGGCGT CGCTGTCCGG TGCCCTCGCC GCGGGTCTGC GCCGGCGCGG CGTCGCCGAC
TCGGACGCCA GCCTGGCCGC GGAGGCGGGG ATCGCCGTCT TCCGGGTGGC GTTCGAGCGT
TGGGTCGGCG AGCCGACCGA CCGGGGCCTG ACGACGATCA TGCGCGAGTC GCTGGAACAG
TTGAAGGCCC TCACAGCTGC CAGCTGA
 
Protein sequence
MGRWEPNARG RLSEAAMELY VERGFEQTTV AEIAQRAGLT ARTFFRYFAD KREVLFAGST 
ILEEHLIAAL ESTPASASPM EAVAAALDAA ATMLGQRREF SRRRQSVIAA NAELRERELI
KMASLSGALA AGLRRRGVAD SDASLAAEAG IAVFRVAFER WVGEPTDRGL TTIMRESLEQ
LKALTAAS