Gene Franean1_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3650 
Symbol 
ID5672017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4325862 
End bp4327148 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID641242534 
Producthypothetical protein 
Protein accessionYP_001507954 
Protein GI158315446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.940234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCG CCGGTGACCC GAACACTCGA CCGGTGCTCG CGACGCCCGC GCAGATCCTC 
GCCGAGGAGA CCCTCCTCCA GCTGCTCGAC GGCCCTGCCC TGAAGAACGT GCGAGCGGAG
CTTTACGCCG AGCTGGCGGC GACACCCAGG GGGCAGTCGA AGTCGGGCGC GGCCACCCTT
GACGAGGCGA TGTCGCAGTG GACGAATTCG CTCGTCATGG CCGAGATCGG GAACTTTCTG
CCGACCCCCG CGCCGGTGTG GGGAACGGAT GACACGCCGC GTGAATGGCT CGGCCACACG
CTTCCCGGTG TCGGAACCTC GGGAGACAAT CCCGACGCGC TCTACCGCAC CACCTTCCTC
GAGGGAGACC GGCGCTACGA GGTCGTCGGC CAGTTCGACC TGGCGCGGCG GCCCGCGCAG
CTCAACATCG AGCTGCACCG GGGGAACAAG GTCAGCCCCC CGCCGATCGA TCTCGACAAG
TCGGACCTGA CGCCGCTCGC CAGCATCACC GACCGTGATC TGCAGATCGC CGCCGACGGG
TCGTTCCGCA TCACCATCGG CCCGGAACCG GAGAGCCCGG TGCACCTGCT GTCGGCTCCG
GGCAGGCTGA CCCTCGGTTC CCGCGACATG CTCGCCGACT GGGATCAGCG CCCGTGCCGC
ATGGAGCTGC GCCCGCTCGA CGACGTGCCG CCCGGCACCT TCGATCCCGA GGAGATCGGG
AAGGCCGCCA GCCGCGACCT TGCGCCCTAC GTCCGCTTCT GGGCGAAGTT CCCGGAACTC
TGGTTCGGCG GCCTCAAGGG CAACAAGATC ACGCCTGCTC AGGGCCGCAA CGGCAGCATG
GCGGGCTTCA TGGCGGCGCT CAGCTGGGAC CTCGCCGCGG ACCAGGCCAT CATCGTCACC
ACCGATCCGA TCGGTGCCGC CTACACCGGC TTCCAGATGA TGGACCCCTG GATGATCAGC
GCGAACGGCA AGAAGGCCCA GGTTTCCCTC AACCGTGGCC AGACCGCGCC GAATCCGGAC
GGCACCTTCA CCTTCGTGCT GTCACACGAG GACCCCGGCG TCGCCAACTG GCTCGACACG
ACCGGTCTCG ACGAAGGACT CGGGCTGATC CGGTGGCAGG CCGCGCCGGC CGGCGCAACG
ATCGACACGA GCACCCTCGT GCGCGAGTTC AAGGTCGTCT CGCTCTCCGA GGTGGACGCG
TTGCCAGATC TCCCCCGCGT CACGCCCGAG CAGCGCGCGG CGCAGCTGGC CGCGCGGGTC
GAGGGATACA ACAAACGGAC CCTGTAA
 
Protein sequence
MTFAGDPNTR PVLATPAQIL AEETLLQLLD GPALKNVRAE LYAELAATPR GQSKSGAATL 
DEAMSQWTNS LVMAEIGNFL PTPAPVWGTD DTPREWLGHT LPGVGTSGDN PDALYRTTFL
EGDRRYEVVG QFDLARRPAQ LNIELHRGNK VSPPPIDLDK SDLTPLASIT DRDLQIAADG
SFRITIGPEP ESPVHLLSAP GRLTLGSRDM LADWDQRPCR MELRPLDDVP PGTFDPEEIG
KAASRDLAPY VRFWAKFPEL WFGGLKGNKI TPAQGRNGSM AGFMAALSWD LAADQAIIVT
TDPIGAAYTG FQMMDPWMIS ANGKKAQVSL NRGQTAPNPD GTFTFVLSHE DPGVANWLDT
TGLDEGLGLI RWQAAPAGAT IDTSTLVREF KVVSLSEVDA LPDLPRVTPE QRAAQLAARV
EGYNKRTL