| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3559 |
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| Symbol | |
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| ID | 5671928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4223260 |
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| End bp | 4224840 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242445 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001507865 |
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| Protein GI | 158315357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.43971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTG CTCTCAACCG TCGCGCGTTC GGGCGTGCCG GCCTGCTCGC CGTCGGCGCC
CTCACGGCGC CGGCACTGCT CGCGGCCTGT GGCGACGACG CCCCCGCCGC ACCAGGCGCG
GGCACGGGCG CGGCGGGGGC GACAGCGGCC CCGCGCCGCG GCGGGAAACT GCGGGCCGCG
TTCGCGAGCA GTCCGGCCGA CACCCTGGAC ATCGTGAAAG GCCACGACGT GCTGGGCTCG
GTGCGCGGCC TCGCGGTGTA CGAACGCCTC GGCGACGCCC ACCCGGACGG CTCGGTCTCC
CCGCGCCTGT TCGAGAGCCT GACGCCCAAC GCCGACGCGA CCGTCTGGAC GCTGAAGCTG
AAGCCGGGGA TCACCTTCTC CGATGGCAGG CCGTTGACGA CGGCCGACGT GCTGGCCAGC
TTCGCGACGT TCACCGGCAC CGAGAGCGGC GCCGCGATCG CCGCGTTCGA CCCGAAGGAG
AGCAAGGCGA CGGACGCGCG CACCGCGACC ATCGCGCTGA CCGCCCCCGT GTACGACCTG
CCGGCCCGGG TGAGCGGCGT CGTCCTGGTG ATCATGCCGG AGGGCAAGCC GGCGTCTCAG
CTCGGTGACG TCGTCGGCAG CGGGCCCTAC GAGATCGCCT CGTTCGTGCC CGGCCAGCGG
ACGGTCCTGC GCAGGCGCAC CGACTACTGG GACGGCGACG CCCGGGGCTA CCTGGACGCG
ATCGAGCTGG TGGCCGCGCC GGACGCGAAG TCGCGGCTGT CCGCGCTGCG GGCGGGCCAG
GTGGACTGGG CCGACGACAT CGCCTACCTG GACGCCTCGA CCCTGCGGGA GGACCGCGCG
ATCACGATCC ACCGCGGCGC GGCCGAGCAG GGCCTGGCCT GGTTCCTGAA CATGGCGGCG
CCGCCGTTCG ACGACGAGCG CGTCCGGCAG GCCCTGCGGT ACTCGGTGGA CCGCCAGAAG
CTCGTCGACA CCACGCTGTT CGGATTCGGC TCCGTCGGCA ACGACCTGTG GGGCAAGGGC
CTGCCGAACT ACAACGGCTC GATCCCGCAG CGGCCGCACG ACCCCGCGAA GGCGAAATCG
CTCCTGCAGG AGGCCGGGGT GGCCACCCCG GCCAAGGCCA CCCTGCTGAC CTCGCCCATC
GGCCCGGGTC TCGTCGAGGC GACCCAGCTC CTCGCCGACC AGGCCCGCGA GGTCGGCTTC
GACATCAAGG TCGAGGTCAT CCCGCCGGAC GTCTACTTCG CCCGGCCCGA GGAGTGGGCG
AAGGCGTCGG GCGTGGCGTT CGCCCAGGTC GGCGCGTTCA CCGACATGGC CCCGCTGGTC
TACCTGTCCG ACGGCCCGTT CAACTTCGGC TGGCGCAAGC CCGACTGGGA CGCCGGGTTC
GCCGACGGAG TGGGCGAGCT CGACGCCGCG AAGCGCAAAG CGACGTTCGA CGGCCTGCAG
CAGCAGCTCT GGGATTCCGG CTCCGACCTC GTGTGGGGGT TCGCGCCGAG GCTCGTCGCC
GCCGCGCCGT CCGTCGGGGG CGTCGACTCC AGTCCCAACT TCGGCATCCC GGACCTGGTC
TTCATCCACC GCACGGGGTG A
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| Protein sequence | MNVALNRRAF GRAGLLAVGA LTAPALLAAC GDDAPAAPGA GTGAAGATAA PRRGGKLRAA
FASSPADTLD IVKGHDVLGS VRGLAVYERL GDAHPDGSVS PRLFESLTPN ADATVWTLKL
KPGITFSDGR PLTTADVLAS FATFTGTESG AAIAAFDPKE SKATDARTAT IALTAPVYDL
PARVSGVVLV IMPEGKPASQ LGDVVGSGPY EIASFVPGQR TVLRRRTDYW DGDARGYLDA
IELVAAPDAK SRLSALRAGQ VDWADDIAYL DASTLREDRA ITIHRGAAEQ GLAWFLNMAA
PPFDDERVRQ ALRYSVDRQK LVDTTLFGFG SVGNDLWGKG LPNYNGSIPQ RPHDPAKAKS
LLQEAGVATP AKATLLTSPI GPGLVEATQL LADQAREVGF DIKVEVIPPD VYFARPEEWA
KASGVAFAQV GAFTDMAPLV YLSDGPFNFG WRKPDWDAGF ADGVGELDAA KRKATFDGLQ
QQLWDSGSDL VWGFAPRLVA AAPSVGGVDS SPNFGIPDLV FIHRTG
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