| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3553 |
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| Symbol | |
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| ID | 5671922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4214490 |
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| End bp | 4216325 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242439 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507859 |
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| Protein GI | 158315351 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.403962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG ATCGAGGAGC GCTGGCGGCG CTGCTGCGGC CCATCCGGGG GCGGCTGTGG
CTCGCCACCG CGGCGCAGGG CGTCTCCGCG GCCGTGAGCG TCGTGCCCTT CATCGCCGCC
GCGGAGCTGG GGCGCGTCCT GCTCGACGAC GGCCCGGTCG ATCACGGGCG CGCCTGGGCG
ATCACCTGGG TCGGCGTCGC GGCCCTGTTC GCGCGGCTGG TCCTCCTGGC CGCGGCCGGC
GGGGTGAGCC ACTTCGCGGA CAACCGGCTG CAGCTCGACA TCCGCCGGCG GATCGTCGGC
CACCTCGGCC AGGTGCCGCT GGGCTGGTTC TCCGAACGCA ACTCCGGCAC GGTCAAAAAG
GCCGTCCAGG ACGACGTGAC GACCATGCAC CACCTGGTCG CGCACTCCCG GCTGGAGATC
ACCGCGGCGA CCGTCGTGCC GTTGACGACC CTGGCCTACC TGTTCTGGGT CGACTGGCGG
ATGGCGCTGG TCACCCTCGC TCCGCTGATC GTCGGCCTCT ACTTCTACGG GCGGAACCTC
GCGGCCGTCG GCGCCCAGCT CCAGCCGTTC GACGAGGCCA CGCGGGCCAT CAGCGCGAGC
ACGGTCGAGT TCGTCGACGG CATCGCCGTC GTGAAGATCT TCGGCCGGGC GCGCGGCGCG
CACGAGCGCT TCACCCGGGC GGCCGACGAC TACTCGACCT TCTTCAAGGG CTGGGTCACC
TCGACGATCG GCCTGCGCGC GATCTCGGAG ATCCTGCTCT CCCCGGTGGT GGCGCTGCTC
ACCGTCCTCG TCGGCGGCGC GCTGCTCGTC ACGAAGGCCG ACATGGCGCC CGTCGACCTG
CTGCCGTTCG CGCTGCTCGG TGCTGGCCTG GCCGCGCCGA TCCTCGCGCT CAGCTACGGG
ATCTACAACA TGCGCACCGC CCACCAGGCG GCCGCGAACG TGACGGGCGT GCTGGCCGTG
CCCCCGCTGC CCGTCGCCAC CGAGCCCGAC GTGCCCGCCG GCAACGATGT CGTCTTCGAG
GACGCCCGGT TCTCCTACGA CGGGGAGACC GAGGTCCTAC GGGGCATCGA CCTGACCCTG
CGCCCCGGGA CGATCACCGC GCTGGTCGGG GCGTCGGGCT CCGGCAAGTC GACCCTCGCG
TCGCTGGTCC CGCGCTTCGG TGACGTCACC GGCGGCGCGA TCCGGGTGGG CGGGGTCGAC
CTGCGCGACG TCGCCCCCGA CGAGCTGTAC CGCCGGGTCG CCTTCGTCTT CCAGGACACC
CACCTGCTGC GTGACTCGAT CGCCGACAAC ATCCGGCTGG CCCGGCCGGA GGCCGATCTC
GACGAGGTGC GCGCCGCCGC CCAGGCCGCG CGCATCGACG GCCGCATCCG CGAGCTGCCC
CGGGGCTACG ACTCCGTCAT CGGCGAGGAC GGCCAGCTCT CGGGCGGCGA GGCGCAGCGG
GTCGCGATCG CCCGCGCCCT GCTCGCTGAC ACCCCCGTGA TCGTGCTGGA CGAGGCGACG
GTGTTCACCG ATCCCGAGGC CGAGGCCGAC ATCCAGGACG CTCTCTCCGA ACTGACCAGG
GAGAAGACGG TGCTGGTCAT CGCCCACCGG CTCGCCACGA TCGTCGCCGC CGACCAGATC
GTCGTTCTCG ATGACGGCGC GATCGCCGAG CGGGGCACCC ACACCGAGCT GGTCGCGGCG
GGCGGTGTCT ACGCCCGGAT GTGGACGGCG CACGAGCGCG CCGCCGACCC GCACGCACGT
CCCGGCCCCG CCATCCCGGC GCCCGGCGTT CGCGGTGCCC CTGGCGGCGT TCGCGGTGCC
GCGGGCGTGC TGACCGGAAC GGAGGAGGCC CGGTGA
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| Protein sequence | MNEDRGALAA LLRPIRGRLW LATAAQGVSA AVSVVPFIAA AELGRVLLDD GPVDHGRAWA
ITWVGVAALF ARLVLLAAAG GVSHFADNRL QLDIRRRIVG HLGQVPLGWF SERNSGTVKK
AVQDDVTTMH HLVAHSRLEI TAATVVPLTT LAYLFWVDWR MALVTLAPLI VGLYFYGRNL
AAVGAQLQPF DEATRAISAS TVEFVDGIAV VKIFGRARGA HERFTRAADD YSTFFKGWVT
STIGLRAISE ILLSPVVALL TVLVGGALLV TKADMAPVDL LPFALLGAGL AAPILALSYG
IYNMRTAHQA AANVTGVLAV PPLPVATEPD VPAGNDVVFE DARFSYDGET EVLRGIDLTL
RPGTITALVG ASGSGKSTLA SLVPRFGDVT GGAIRVGGVD LRDVAPDELY RRVAFVFQDT
HLLRDSIADN IRLARPEADL DEVRAAAQAA RIDGRIRELP RGYDSVIGED GQLSGGEAQR
VAIARALLAD TPVIVLDEAT VFTDPEAEAD IQDALSELTR EKTVLVIAHR LATIVAADQI
VVLDDGAIAE RGTHTELVAA GGVYARMWTA HERAADPHAR PGPAIPAPGV RGAPGGVRGA
AGVLTGTEEA R
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