Gene Franean1_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3539 
Symbol 
ID5671909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4198051 
End bp4198491 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content74% 
IMG OID641242426 
ProductMarR family transcriptional regulator 
Protein accessionYP_001507846 
Protein GI158315338 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.107907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACC GCCACGGTCA GGTGCCCGGT CGGTGCGGAT GCGAGAATCT GCACATGCAC 
CGGCTGGACG ACCAGAACCG GGCCCGGATC ATCGACGGCG ACCGGGCCTG CGACGCCGTC
GCCGCCATCG GTGACCGCGA CGAGGTGACG CGGTGGGCCG CCCGGTTCGC CATGCTCGGC
GAACCGGGCC GGCTCGCCAT CCTGCTCGCG GTGCACTACG CCGGCCCGAT CTCCGTCTCG
GATCTGGCCA CCGCCGTCGG CATGAACGAC GCCGCCGTCT CCCAGGCACT GCGGGTCCTG
CGCCAGCAGA ACGCCGTGCT CGCCGAGCGC GACGGCCGGA TCATCCGCTA CAGCCTCGCC
GACCCCGCCG TCGCCGACCT GCTGGGCCGC GTCCGGCCCG ATCCCCAGCT CCACCACCGG
TCCGGCCAGC CCGCCCGCTG A
 
Protein sequence
MHNRHGQVPG RCGCENLHMH RLDDQNRARI IDGDRACDAV AAIGDRDEVT RWAARFAMLG 
EPGRLAILLA VHYAGPISVS DLATAVGMND AAVSQALRVL RQQNAVLAER DGRIIRYSLA
DPAVADLLGR VRPDPQLHHR SGQPAR