| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3526 |
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| Symbol | |
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| ID | 5671896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4186376 |
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| End bp | 4187254 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242413 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001507833 |
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| Protein GI | 158315325 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.799707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTCC TCGTCACCGG CGACCAGAGC CCTGTGGGCA TGGCGGTCAC GGCCACCTTG
ACCACGGCTG GGCATCAGAT CGTCGGGTTC GACCTCGTCG GCGGTCACGA CGTCCGCGAC
ACCGCCGCTG TCGAACGCGC CTGCGCAGGC TGCGACGCGG TGGTGCACCT GGCCGCCGTC
GACGAACCCG TCACCGACCC GGACCTGGCA CGGTTCGGAC CCGCCACCAC CGGATCAGAC
AGGATGATCT TCGAGACCAA CGTGCTCGGC ACCGGCAACG TTCTGCGGGC AGCCGAACGC
CACGGCCTGT CCCGGGTGAT CCTGATGAGC AGCGTGCACG TGCTGGGATG CTTCGGCGGC
CGCGGCGAAC CCGCCTACCT TCCCCTCGAC GACCAGCACC CCGCGGCCCC CGTGGGGCCG
TACGCCCTGT CGAAGTGGCT CGCCGAGCAG ATGTGCGCGG CCACCACCAC CGCGACCGGC
ATCGCCACGG TCTGCCTGCG CCCGCCGGGG GTGTTCACCG CGGCGACCTA CGCCGGGATC
CGGCGGGCCC GACGGGACAA CCCCTCCTTC GAATGGTCCC CGATCTGGGA GTGCGGCGCC
TTCCTCGACG TGCGCGACCT CGCCACCGCG GTCGAGCGTG CGCTGACCGT CCCGCTGGCT
GGCCATCACC GGCTCCTGCT GTGCGCCGCC GACATCTCCT CGGCCGAACA CGGCTCCCGC
GAGCTGGTCG GACGGCTTCT TCCCGACGTG CCGTGGCGGG GCGGGGCCGA GTACGACGAC
GAACCGTTCC GGTCGCTGAT CGACACCGCC GGCGCCCGTT CCCTACTGGG CTGGACGCCA
CACCACTGCT GGCGGCCGGC GTCGTCCGCG CACGAGTAA
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| Protein sequence | MRVLVTGDQS PVGMAVTATL TTAGHQIVGF DLVGGHDVRD TAAVERACAG CDAVVHLAAV
DEPVTDPDLA RFGPATTGSD RMIFETNVLG TGNVLRAAER HGLSRVILMS SVHVLGCFGG
RGEPAYLPLD DQHPAAPVGP YALSKWLAEQ MCAATTTATG IATVCLRPPG VFTAATYAGI
RRARRDNPSF EWSPIWECGA FLDVRDLATA VERALTVPLA GHHRLLLCAA DISSAEHGSR
ELVGRLLPDV PWRGGAEYDD EPFRSLIDTA GARSLLGWTP HHCWRPASSA HE
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