Gene Franean1_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3509 
Symbol 
ID5675715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4170166 
End bp4171362 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID641242396 
ProductDNA (cytosine-5-)-methyltransferase 
Protein accessionYP_001507816 
Protein GI158315308 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT ACCGGCTCGA CCCGGCAGCC GAACAGGCGG CCGGAATGGA GGAGCACTGC 
GGGCACGCGC GTTTTGTCTG GAATCTCGCG GTCGAACAGC AGTCGTGGTG GAAACCCGGC
CGGGGGAACG CGCCGAACCA TGCGGAGCGT TGCCGGCAGT TGACCGAAGC GCGGGCGGAG
TTCAAGTGGC TGCGGGCCGG TTCGCAGACC TTTCAGCAGC AGGCGCTTCG AGACTTCGAC
CAGGCTATGC GGAACTTCTT CAACGGCTCG CACCGCCGCC CGATCTTCCG GAAACGTGGC
CGGTCCGATG GTTTCCAGAT CGTGGGGAAG AACGCACGGG TCGAGAATCT GAACCGGAAG
TGGTCCCGAT GCTGGATCCC GAAAGTCGGC TGGGTGAGGT TCCGCGTGTC GCGGACGATC
CCGGACTTCA GGTCGTACCG GGTGACACGG GATCGGGCGG GCCGCTGGCA TGTGGCGTTC
GCCGCGGCAC CTGACCCGAT CCCCGCGCCG GGAACCGGCG AGGTCGGCGA GGTCGTCGGT
GTGGATCGGG GTGTTGCCGT GTCCGCGGCG CTGTCCACCG GGGAGCTGCT GTCCTGCCCG
AAACTGAGAC CGAAGGAAGC GGAACGGCTC CGCCGGCTCC AGCGCCGGTT GGCGAAAGCC
ACACGCGGGT CGAACCGGCG TGGCCGGCTG AAGACCCAGA TTGCCCGGGT GAAAGTCCGG
GAGGCCGACC GGCGGAAAGA CTGGGTGGAG AAAACCTCCA CCGATCTTGC CCGCCGGTTC
GACGTCATCC GGGTGGAGGA TCTCCGTATC AAGAACATGA CCCGGTCGGC CCGAGGTACT
GTCGACCAGC CGGGCCGGAA TGTTCGACAG AAAGCCGGGC TGAACCGGGG CATCCTCGCC
AACGGGTGGG GTCTCCTTGC CCGGCGGTTG GAACAGAAAG CACCCGGCCG GGTGGAGAAG
ATCCCGGCCG CCTACACCAG TCAGTGTTGC TCGTCCTGCG GGCATGTGGC GCCCGGGAAC
CGCGAGAGCC AAGCGATGTT CCGGTGCGTC GCCTGCGGGC ACACGGCCAA CGCGGACGTG
AACGCGGCAC GCAACATCGC GGCTGGACGG GCCGTGACCG CGCGGGGAGG CACGGTGTTG
GCCGCGCCCG CGAACCGCGA ACCTCAACAT TCCACACCTC CTCTGGTGGG TGTGTAG
 
Protein sequence
MSRYRLDPAA EQAAGMEEHC GHARFVWNLA VEQQSWWKPG RGNAPNHAER CRQLTEARAE 
FKWLRAGSQT FQQQALRDFD QAMRNFFNGS HRRPIFRKRG RSDGFQIVGK NARVENLNRK
WSRCWIPKVG WVRFRVSRTI PDFRSYRVTR DRAGRWHVAF AAAPDPIPAP GTGEVGEVVG
VDRGVAVSAA LSTGELLSCP KLRPKEAERL RRLQRRLAKA TRGSNRRGRL KTQIARVKVR
EADRRKDWVE KTSTDLARRF DVIRVEDLRI KNMTRSARGT VDQPGRNVRQ KAGLNRGILA
NGWGLLARRL EQKAPGRVEK IPAAYTSQCC SSCGHVAPGN RESQAMFRCV ACGHTANADV
NAARNIAAGR AVTARGGTVL AAPANREPQH STPPLVGV