Gene Franean1_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3505 
Symbol 
ID5671876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4166975 
End bp4167850 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content72% 
IMG OID641242393 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001507813 
Protein GI158315305 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTATCA CGCACCCCCA CACCGGTTTC CGGCCCCGGG CGGACGTCGC CGTCCCCGTC 
CGGTTCGTGG TCGGCTCGGC CCGGGACACC CCGCTGCGCG TGGTTTTCCG GCGGGCCCGC
CCGGAGGACC TGGTGGACGT CCACCCGATC TCCGACCCCC AGGCCGTCGA ACCGTCCGCT
GTCGTGCCTT CCGCCGTCGG ACGGATTCCC GTCCGGCGCG ACCCTGGTGA CGTCGCCGAC
GCGGCGGAGT TCCACGTCCT GACGGTGGAC GACGTGGTGA TGGCGACCGT GGGCCTGCGA
CCACTGACCC CGAGAACGAC AGGAACGGCG GGAACGGCGG AGCTGCACGA CCTCTGGGTG
GCGCGCGGCT GGCGGCAGCG CGGATTCGGT CGGCTGCTGC TGGCCTGCGC CCTCACCCAG
GCCGCGGCGG CCGGCTTCGA CCAGGTCGTC CTGCTGCCCC GGACAGCAGC CGGATGGTTT
CACCGCCACG GCTTCACCCC GGTGGGCCGC GACGCCCTCC CCGCGGACCA CCGGGCGTTC
GTCGACGAGT CCCACGGCCC GGGTCTCCTC GGTCACGGCA GCGAACCCGG CCATCCCGTG
GACCTGCTGT CCCGGCTGTC AGACCTGCGG GTGACGTTCA CCCGCTCGGG CCGGGAACTG
CGCTGGGATC CGGCGGAGGA CACGATTCTC CTGCTCGCCG ACTCGGCCGG TGTCCAGCTC
GACTCGATGT GCTGGAGCGG GGTGTGCGGC ACCTGCCGGT CCACGCTGGT GTCCGGGACG
GTCCACTACC TCTCGGAACC TATGTGCGAC CTGGCCGAGG GGGAGATCCT CCCCTGCGTC
ACGGCCCCGG TCACCGACAT CGTCCTCGAC GCCTGA
 
Protein sequence
MSITHPHTGF RPRADVAVPV RFVVGSARDT PLRVVFRRAR PEDLVDVHPI SDPQAVEPSA 
VVPSAVGRIP VRRDPGDVAD AAEFHVLTVD DVVMATVGLR PLTPRTTGTA GTAELHDLWV
ARGWRQRGFG RLLLACALTQ AAAAGFDQVV LLPRTAAGWF HRHGFTPVGR DALPADHRAF
VDESHGPGLL GHGSEPGHPV DLLSRLSDLR VTFTRSGREL RWDPAEDTIL LLADSAGVQL
DSMCWSGVCG TCRSTLVSGT VHYLSEPMCD LAEGEILPCV TAPVTDIVLD A