| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3477 |
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| Symbol | |
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| ID | 5671848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4134721 |
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| End bp | 4135584 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242365 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001507785 |
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| Protein GI | 158315277 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0280346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0383606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCC CCACGCTTCG CATCCCGGGC CGGCCGGCGC GGTCGGCCCG GCTGGGCCGG
CCGCGCCCGG GTGTGGTGAT CGCCGCGCTC GTGCTGCTGT TGTTCCTCCT GGCGGCGGTC
TGGCCGTCGC TGTTCACCGG CACCGGTCCC ACCGACGGGG ACCTGCTCGC CACCCTGCAG
GCGCCGGGCG GCAAGCACTG GTTCGGCACC GACCAGCTCG GCCGGGACGT CTTCGCCCGG
GTCGTGCACG GTACCCGTTA CTCGCTGACC ATCGGCCTAG CCGCCACCGG CATCGCCGTC
GTGATCGCGA CCGTCTGGGG GCTGGCCGCC GCGCTGAGTG GCCGGTTCGT CGACGGGCTG
CTCATGCGGA CCACCGACGT GATGCTGGCG CTGCCCCCGC TGCTGCTCGC ACTGATCGTC
GTGATGATCA CCGGCAAGGG CGTGGTCGGC GTCACGCTGG CCGTCGCCGT CAGCGGTGTT
CCCGGGTTCG CCCGGGTGAT CCGCGGCCAG GCGCTGGTCG TCCGCCGCTC CGGGTACGTG
AGCGCGGCCG TCGGGCTGGG CGTACGCCGG TGGCGGGTCG CCGCCCGGCA CGTGCTGCCG
AACACCCTGG CGCCGCTGCT GGTCTTCGCC ACCGTCACCC TCGGCATCGC CATCGCCTCG
GCGTCGGCGC TGAGCTACCT CGGCCTTGGC GCCCAGCCGC CCAGCCCCGA GTGGGGGGCG
ATGCTCACCG AGGGCCAGGA CTACCTGGGG CAGGCCTGGT GGATCGCGGT GTTCCCCGGC
CTGCTGCTGG TCGTCGTGGT CCTCGCGGTC ACCGTGCTCG GCCGCCACGC GCAGGCCAGG
TCAGAAGGGC GGGTCTGGTC ATGA
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| Protein sequence | MSVPTLRIPG RPARSARLGR PRPGVVIAAL VLLLFLLAAV WPSLFTGTGP TDGDLLATLQ
APGGKHWFGT DQLGRDVFAR VVHGTRYSLT IGLAATGIAV VIATVWGLAA ALSGRFVDGL
LMRTTDVMLA LPPLLLALIV VMITGKGVVG VTLAVAVSGV PGFARVIRGQ ALVVRRSGYV
SAAVGLGVRR WRVAARHVLP NTLAPLLVFA TVTLGIAIAS ASALSYLGLG AQPPSPEWGA
MLTEGQDYLG QAWWIAVFPG LLLVVVVLAV TVLGRHAQAR SEGRVWS
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