Gene Franean1_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3440 
Symbol 
ID5671811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4070755 
End bp4071195 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID641242328 
Productpyroglutamyl-peptidase I 
Protein accessionYP_001507748 
Protein GI158315240 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID[TIGR00504] pyroglutamyl-peptidase I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG ATCTACCGGA TCAGACCCCA CCACGAGGGC GAATCCCGCA GACAGATCAC 
AACTCGACAC GCGCCCTAGA GGACGACCTC ACTGATCCGA ACGGTCCGGT GGCGTACTGG
TCGACCCTTC CGCTGCGCGC GATGGTCCTG GCGATGCGCC AGGCCGGCAT CCCTGCCGAC
ATCTCCGACA CGCCCGGCAC GTTGATGTGC AACCACCTCA TGTACGGCGT GCTGCGATAC
GTCGCGACCC ATGACCTCCC GCCCCGCGTC GGATGGATCC ACATGCCCCA CCTCCCGGAG
GTGGCCGCAC TGGATAGCAA TCTCGGCGCA CCGAGCATGT CGCTGGCGAC GTCGGTCGCC
GGAGTCCGGG TCGCCGTCTC GGCAACGCTG GAGCACGCGA GCGACGTCCA CGCCCACGTC
CACTCCCGGC TGCAGATCTG A
 
Protein sequence
MQDDLPDQTP PRGRIPQTDH NSTRALEDDL TDPNGPVAYW STLPLRAMVL AMRQAGIPAD 
ISDTPGTLMC NHLMYGVLRY VATHDLPPRV GWIHMPHLPE VAALDSNLGA PSMSLATSVA
GVRVAVSATL EHASDVHAHV HSRLQI