Gene Franean1_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3402 
Symbol 
ID5671773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4033648 
End bp4033890 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content69% 
IMG OID641242290 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001507710 
Protein GI158315202 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCG GGATACCTGG CCGGATCGTG GCGACCGTCG ACGTCGCCGG CCTGCTCATG 
GGCACGGTCG ACTTCGACGG GCTGACCCGC GAGGTCTGCC TCGCCTACGT CCCCGACGCG
CGGGTCGGCG AGTACGTAAT CGTTCACGTG GGGTTCGCCA TCAGCATGGT CGACGAGGCC
GAGGCGCACC GCACCCTGGA GATGCTCCGC TCGATGGGCG CCACCCTGGA GGCGGAGCTA
TGA
 
Protein sequence
MCLGIPGRIV ATVDVAGLLM GTVDFDGLTR EVCLAYVPDA RVGEYVIVHV GFAISMVDEA 
EAHRTLEMLR SMGATLEAEL