| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3400 |
|---|
| Symbol | |
|---|
| ID | 5671771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4031478 |
|---|
| End bp | 4032566 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641242288 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001507708 |
|---|
| Protein GI | 158315200 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG TTGACCCCAC CTTCGCCAGC TGCGCGCTCC CCCGCGTCGA GACCGAGCGG
GTCACGCTCG GGCACGGCAG CGGCGGGCAG CTCTCCGCCG AGCTGCTCCG GGACGTCCTG
CTGCCCGCCC TCGGCGCGGG CTCGGCCCTG GCCGCGCGGG CGGGCCAGCC CGACGGCGGC
GTCCTCGAGG ATGCCGCCGT GCTCGACATC GACGGCGTCA CCCTGGTGAC CAGCACCGAC
GCGTTCGTCG TGAGCCCGCT GTTCTTCCCC GGCGGGGACA TCGGCACGCT CGCCGTCCAC
GGCACCGTCA ACGACCTGGC CATGATGGGC GCCACGCCGC TCGCGCTCAC CGTCGCCTAC
ATCATCGAGG AGGGCTTCCC CCTCGACGAC CTGCGGCGGA TCATCGCCTC CGTCGGTTCG
GCCGCGGCGG CCGCCGGGGT CCCCGTCGTG ACCGGTGACA CCAAGGTCGT GCCCCGCGGC
GCCGCCGACG GCATCTTCGT GACCACGTCC GGCATCGGAC GCCGCCTGCC CGCCGCGCGC
GTCTCGGCGG CCGCCGCCCG CCCCGGCGAC GCGGTGCTCG TCTCCGGGCC GATCGGCGCG
CACGGCACCA CCGTGCTCTC GGCGCGGGAG GCCCTCGGCT TCGAGGCCGA CATCGCCTCC
GACACCCGCC CGCTGCACCG TCTCGTCCAG GCCATGGTGG AACGCCGCGG CGGCGACATC
CACGTGATGC GCGACCCGAC CCGCGGCGGG GTGGCGTCGG CGCTCAACGA GATCGCCGCG
GCGTCCGGTG TCGGTGTCGA GATCGACGAG ACGGCGCTGC CCGTGCCGCC GCTGGTCGCC
GCCGCCTGCG ACCTGCTCGG TCTCGACCCG CTGCATGTCG CCAACGAGGG CTGCCTGATC
GCCGTTGTCG CGCCCGAGGC CGCCGACGAG ATCCTGGCCG TCATGCGTTC GCGCCCCGAG
AGCCGGCACG CCACGTGCCT GGGCGACGTC GTCGCCGGTC ATCCTGGTCG CGTGGTGATG
CGTACGCTGC TGGGCAGCAC CCGGCTCGTC GACATGCTCG TAGGCGAGCA ACTCCCCCGC
ATCTGCTGA
|
|---|
| Protein sequence | MTTVDPTFAS CALPRVETER VTLGHGSGGQ LSAELLRDVL LPALGAGSAL AARAGQPDGG
VLEDAAVLDI DGVTLVTSTD AFVVSPLFFP GGDIGTLAVH GTVNDLAMMG ATPLALTVAY
IIEEGFPLDD LRRIIASVGS AAAAAGVPVV TGDTKVVPRG AADGIFVTTS GIGRRLPAAR
VSAAAARPGD AVLVSGPIGA HGTTVLSARE ALGFEADIAS DTRPLHRLVQ AMVERRGGDI
HVMRDPTRGG VASALNEIAA ASGVGVEIDE TALPVPPLVA AACDLLGLDP LHVANEGCLI
AVVAPEAADE ILAVMRSRPE SRHATCLGDV VAGHPGRVVM RTLLGSTRLV DMLVGEQLPR
IC
|
|---|
| |