| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3398 |
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| Symbol | |
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| ID | 5671769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4028176 |
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| End bp | 4029762 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242286 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001507706 |
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| Protein GI | 158315198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.697295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCA GAGAGAAGTT ACTCACCACC GTCATCGCCT GTTGTGTGGC GCTCGCCGTG
GGCGCCTGCG GCGGCGGTGA CGGCTCGTCC ACGACGACCG GCACCACCAC CACCGCCACC
GGACCCACCG GCGACCCGGT CGCCGGCGGC TCGCTGCGGG TCATGCAGCT CCGCGAGCCC
CGTTCGATGG ATCCGGTCAC CATGACGAAC GCGTGGCAGG TCAACGCGTT CGTGGGCAAC
GCCCTGTACG GCACGTTGAT GATCAACGAT GAGCACACCA ACGAGATCAA GTACACGATG
GCGGAGTCGT TCGCCACCAC CGACAAGGGC GCCACGTTCG CGCTGAAACT GCGACCGGGC
CTGAAGTTCA CCGACGGCAC CCCGCTCGAC GCCGCCGCGG TGAAGTTCAA CTGGGATCGC
CATCGGGATC CGGCGATGGC CTCGCCCTAC CTGCCGGAGG CGTCCCTCAT CGCCTCCACC
GACGTCGTGG ACGCCACGAC CCTCAAGGTG ACGATGACCG AGCCGGTGCC CAGCTTCCCG
GCCGCGCTGC TCACCACGTC CATGAACTGG ATCGCCTCCC CCACCGCCCT GCAGAAGGGC
AAGGCGTCCT TCGACGCGAA ACCGGTCGGC GCGGGGCCGT ACACCGTGCG GACCTGGACC
CGCCAGGACC GCATCGAGCT GGCGAAGAAC CCCGGCTACT GGGACGCCCC CCGGCCCTAC
CTCGACAGCA TCACCATCCG CACGTCGGAC GACTCGGGCC AGCGGTACAA CACGCTGATC
AGCGGCGGCG CCGACGTGGT CATCGACACG AACGCGGACA GCGTCGCCAA GGCCGGGAAG
GCCGGCTACT CGACGGACGT CGCGCCGCTG AGCGGCGGCC TGTTCCTCGC GATGAACATG
CGCAGGGCGC CGTTCGACGA CCTGCGGGCC CGGCAGGCGA TCGCGGCCGC CGTCGACCTG
GACGCGCTGA ACCTGGCCGT GTACAACGGC GCCGCCCAGA CCGCCGACAC GCTGTTCACC
AAGTCCTCGC CGTTCTACTC CGACAAGCCG CTGCGGACGT ACGACCGGGC GAAGGCGCAG
CAGCTGTTCG ACGAGCTGGC CGCCGACGGC AAGCCTGTCA CCTTCACGTT CACCAGCTTC
GCCTCGTCGG AGATCAGGGA CACGACCGAG AACGTCCAGG CCCAGCTCAG CTCGTACAAG
AACGTCAAGG TTCAGGTGCG GGTGGTCGAC TTCTCCGAGT ATCCCAAGAT CCAGGCGAGC
AACGACTTCG ACATGGTCGT CTGGTCGGCG AACTTCATCG ACCCGGACCC ACGGATGTGG
ACGGCGTTCC GCAGCGACTC CCGCGGCAAC TTCCCGGGCG TCAAGGACGA GCGGATCGAC
GCCGCCCTGA AGGCGGGCCG CACGGCGACG ACCGAACAGG AGCGCAAGGC CGCGTACGCC
ACCCTCCAGG AGCGGCTGAC CGCGCTGGTT CCCGCGGTCT TCACCGTCCG GGTGAACCCG
AGCGTCATGG CCGCCAGGAA CGTCGGCGGC GTCACCCAGT ACGGCCTCGG ATCACTCCTG
CCCGAGCCCC TGTGGCTCCA GCCATGA
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| Protein sequence | MFRREKLLTT VIACCVALAV GACGGGDGSS TTTGTTTTAT GPTGDPVAGG SLRVMQLREP
RSMDPVTMTN AWQVNAFVGN ALYGTLMIND EHTNEIKYTM AESFATTDKG ATFALKLRPG
LKFTDGTPLD AAAVKFNWDR HRDPAMASPY LPEASLIAST DVVDATTLKV TMTEPVPSFP
AALLTTSMNW IASPTALQKG KASFDAKPVG AGPYTVRTWT RQDRIELAKN PGYWDAPRPY
LDSITIRTSD DSGQRYNTLI SGGADVVIDT NADSVAKAGK AGYSTDVAPL SGGLFLAMNM
RRAPFDDLRA RQAIAAAVDL DALNLAVYNG AAQTADTLFT KSSPFYSDKP LRTYDRAKAQ
QLFDELAADG KPVTFTFTSF ASSEIRDTTE NVQAQLSSYK NVKVQVRVVD FSEYPKIQAS
NDFDMVVWSA NFIDPDPRMW TAFRSDSRGN FPGVKDERID AALKAGRTAT TEQERKAAYA
TLQERLTALV PAVFTVRVNP SVMAARNVGG VTQYGLGSLL PEPLWLQP
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