| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3342 |
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| Symbol | |
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| ID | 5671714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3955475 |
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| End bp | 3956332 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242231 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507651 |
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| Protein GI | 158315143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.887184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACCA TCGTGATCAC CGGAGGGACC GACGGGATCG GCCAGTCCCT CGCCCGCACC
CTCCTGGGCC GTGGCGACCA GGTCGTGGTC GTCGGCCGCA ACGCCGCCAA GGGAACGGCC
TTCCTCGACG CGGCCAACCG GGCCGGCGCT GGCGGCAGGG CGTTCTTCCT CCAGGCGGAG
CTGAGCCTCG TCAGCGAGAA CGAGAGGGTC GTCGCGTCTG TCACGGAACG GTTCGCCGCG
ATAGACGGGC TCGTGCTGGG AGCGCGCCAC TACCGTTCCG CCCGTCGCGA GACCTCGGAG
GGGTTCGAGG AGAACTTCGC GCTGTTCTAC CTCAGCCGGT ACGTCCTCGG TCACGGCCTC
ACCAGCCTGC TGGAGAAGGG CGCCAACCCG GTGATCGTGA ACATTGCGGG CCCCGGGGCG
GACATCTCCG TCGTCCGCTG GGACGACCTG CAACTACGGC GCTTCTACCA CGGCGGCGCT
GCGCTCGGAC AGGGCGGCAA GCTCAACGAC CTTCTCGGGG TCGCCTTCGT GGCCGCCCAC
GAACACGGCG CCGTCCGACA GCGGCTCGGC GGCGTCCCGC CTGGAAGCCA TCACCCGGCG
GCTGCTGGCC CGCGAACCCA CCGGCGGACG TCGGTGCGCT GTCGCCGAGT AGGCGGGCAC
CCTGGCGGCG TGCTCGCCGG TGGCCACGTC GCCGGGGTGG TCGTGCGGCT CAGGACTCGT
GGGGGACCGC CTCCACCCGG GGCTCAGGAT GCTCGCGGGG GGTGGGCAGC TTCGCGGATT
CGGCTGTCGC CGCCGCTGCC GCCCGCGTCG CCGCGAACGC CGCCCGGGCC GGAGCGCGCA
GGACGACGAG CGTCGTGA
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| Protein sequence | MRTIVITGGT DGIGQSLART LLGRGDQVVV VGRNAAKGTA FLDAANRAGA GGRAFFLQAE
LSLVSENERV VASVTERFAA IDGLVLGARH YRSARRETSE GFEENFALFY LSRYVLGHGL
TSLLEKGANP VIVNIAGPGA DISVVRWDDL QLRRFYHGGA ALGQGGKLND LLGVAFVAAH
EHGAVRQRLG GVPPGSHHPA AAGPRTHRRT SVRCRRVGGH PGGVLAGGHV AGVVVRLRTR
GGPPPPGAQD ARGGWAASRI RLSPPLPPAS PRTPPGPERA GRRAS
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