Gene Franean1_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3322 
Symbol 
ID5671694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3934416 
End bp3935603 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID641242211 
Productamidohydrolase 2 
Protein accessionYP_001507631 
Protein GI158315123 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.883646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC CAGAGTTGAT CATTGACGCG GACAGTCACA TCACCGAGCC GCCGGACGTG 
TGGACCGCTC GGGTGCCGGC GAAGTATCGC GAGGACGTTC CACACGTGGT GCGGCAGGGC
ACGGCGGACA CCTGGGTGCT CCACGGGGAG CGGCTGGCAC CGGTCGGCGT GACGGCTCCG
GCGGGATGGC CGACGTTCCC GCCCGAGTAC CCGCAGACCT ACGAGGACTG CCACCCGGGC
GCGTACCAGG CGGATGCCCG CCTGAAGTAC ATGGACGAGG CGGGTATCTG GGCCCAGGTG
CTCTACCCGA ACGTGGGCGG GTTCGGCAGC GAGAACTTCC TGAAGCTGAA GGACGACACT
CTCAAGCTGC TGTGCGTGTC GGCGTACAAC GACTTTCTCG TCGAGTGGTC CTCGGCCGAC
CTGCGCCGGC TGCTGCCGGT GATCGCCACA CCGTTCTGGG ACATCGACGA GACCGTACGG
GAGATCGAGC GGTGCGCCCC GCTGGGCGCG CGGGGAATCC TGTTCACCGG CGAGCCGCAG
CGCTACGGGC TGCCCGTGCT CGGCTCGCCG CACTGGAACC CGTTGTGGGA GGTCGCCCGC
GCGGCCGACC TGCCGATCCA CTTCCACATC GGCAGCGCCG GAGACACCCT GGAGCTGTCC
ACCCCGGAGC GCTATGCCCT GCACGGCGTG GAAGGGGCGC AGGCCTACTG CGCGGTGAGC
CTGTTCATGA AGAACGGTGT CCAGTGCTCG GATCTGATCA CGTCGGGCGT GCTGTCCCGC
TATCCCGAGC TGAAGTTCGT CTCCGTGGAG AGCGGTATCG GCTGGCTTCC GTTCATGCTC
GAGGCCACCG ACTACAGCTG GCTCGGCGCG TTCCGTCCGG GCCGGGAGCG CCAGTCGGGA
GACGTGCTGC CGTCGGATCT GTTCCGCCAG AGCGTTTTCG TCACCTACTG GTTCGAGTCG
GTCGCCCCGA AGCACTTCCT CGATCTGATG CCGATCGACA ACATCCTCTT CGAGACCGAT
TTCCCGCACA CCACCTGCCT GTTCCAGAAC ATCCAGGAGA CCATCACGTC CGGCCTCGGG
CACGTCGACG GGGGAGCGCG CCGGAAGATT CTCTGGGAGA ACGCGACAAA GCTGTACCGG
ATCGAGGAGC CGTCGGCGTC GTGGCGGGCC ACCGCCGGGA CGAGCTGA
 
Protein sequence
MTAPELIIDA DSHITEPPDV WTARVPAKYR EDVPHVVRQG TADTWVLHGE RLAPVGVTAP 
AGWPTFPPEY PQTYEDCHPG AYQADARLKY MDEAGIWAQV LYPNVGGFGS ENFLKLKDDT
LKLLCVSAYN DFLVEWSSAD LRRLLPVIAT PFWDIDETVR EIERCAPLGA RGILFTGEPQ
RYGLPVLGSP HWNPLWEVAR AADLPIHFHI GSAGDTLELS TPERYALHGV EGAQAYCAVS
LFMKNGVQCS DLITSGVLSR YPELKFVSVE SGIGWLPFML EATDYSWLGA FRPGRERQSG
DVLPSDLFRQ SVFVTYWFES VAPKHFLDLM PIDNILFETD FPHTTCLFQN IQETITSGLG
HVDGGARRKI LWENATKLYR IEEPSASWRA TAGTS