Gene Franean1_3284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3284 
Symbol 
ID5671657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3891646 
End bp3892242 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID641242175 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001507595 
Protein GI158315087 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCG CGGACGCGGT CAGGCCGATC GACGACCACG CCTACGCGCT GTTGCGCAGC 
GGTGATCTCA CGCTCGAGGA GATCATCGAG ATCCCCCTGC ACTTCGCGGT CTACTGCGGC
TGGCCGAAGG CGTCTCACCT CGAGGTCACC CTGCGCACCC AGTGGCACCG GATGTACGCG
GAACGCGGCG AGATCCCACC GGCCTGGCCG GTGCTGCCGC TCGAGGATCT GGGCCCCGTG
GACCGGGAGG AGCGGATCCG GCTCGGGCAG GAGGAGTTCG TCTCGGTCAA CGTGACGCCT
TCGCCGCCGC TGGACTCGCC GTACTTCTTC GCCGGGATCC TCGGCTTCGT CTTCGGGCAC
GTCTGGCGGC GGCAGGCTCT CAGCCGGCGG GACCGGCGGC TCGTGACGAT CCCGTGCGTG
GGGATCTCGG ACACGCAGAC TCCCATCGAC TCGCACGTGG GCTCGGCGTT GGAGACGGGC
GACGTCTCCT GGGACGAGAT GCAGGAGATC ATCCTGCAGT TCAGCGCGTA CTACGGCTTC
GCGAAGGGCG AAGCACTGCA CGCCGCTGCC CAGCGCTGGC GCGCGAACCG CTCGTGA
 
Protein sequence
MAAADAVRPI DDHAYALLRS GDLTLEEIIE IPLHFAVYCG WPKASHLEVT LRTQWHRMYA 
ERGEIPPAWP VLPLEDLGPV DREERIRLGQ EEFVSVNVTP SPPLDSPYFF AGILGFVFGH
VWRRQALSRR DRRLVTIPCV GISDTQTPID SHVGSALETG DVSWDEMQEI ILQFSAYYGF
AKGEALHAAA QRWRANRS