Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3284 |
Symbol | |
ID | 5671657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3891646 |
End bp | 3892242 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641242175 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001507595 |
Protein GI | 158315087 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGCCG CGGACGCGGT CAGGCCGATC GACGACCACG CCTACGCGCT GTTGCGCAGC GGTGATCTCA CGCTCGAGGA GATCATCGAG ATCCCCCTGC ACTTCGCGGT CTACTGCGGC TGGCCGAAGG CGTCTCACCT CGAGGTCACC CTGCGCACCC AGTGGCACCG GATGTACGCG GAACGCGGCG AGATCCCACC GGCCTGGCCG GTGCTGCCGC TCGAGGATCT GGGCCCCGTG GACCGGGAGG AGCGGATCCG GCTCGGGCAG GAGGAGTTCG TCTCGGTCAA CGTGACGCCT TCGCCGCCGC TGGACTCGCC GTACTTCTTC GCCGGGATCC TCGGCTTCGT CTTCGGGCAC GTCTGGCGGC GGCAGGCTCT CAGCCGGCGG GACCGGCGGC TCGTGACGAT CCCGTGCGTG GGGATCTCGG ACACGCAGAC TCCCATCGAC TCGCACGTGG GCTCGGCGTT GGAGACGGGC GACGTCTCCT GGGACGAGAT GCAGGAGATC ATCCTGCAGT TCAGCGCGTA CTACGGCTTC GCGAAGGGCG AAGCACTGCA CGCCGCTGCC CAGCGCTGGC GCGCGAACCG CTCGTGA
|
Protein sequence | MAAADAVRPI DDHAYALLRS GDLTLEEIIE IPLHFAVYCG WPKASHLEVT LRTQWHRMYA ERGEIPPAWP VLPLEDLGPV DREERIRLGQ EEFVSVNVTP SPPLDSPYFF AGILGFVFGH VWRRQALSRR DRRLVTIPCV GISDTQTPID SHVGSALETG DVSWDEMQEI ILQFSAYYGF AKGEALHAAA QRWRANRS
|
| |