| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3222 |
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| Symbol | |
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| ID | 5671598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3803671 |
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| End bp | 3805725 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242116 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001507536 |
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| Protein GI | 158315028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGT ACGTCTTGGC CGGCCTTGCG CTCGGCTCCA TCTACGCCAT CGCCTCGTCA
GCGTTGGTGA TCACATACGT CTCGACCGGC GTGTTCAACT TCGCCTTCGG GTCGATGGCA
TTTTTTGTGG CGAGATTCTA TTACTGGCTC AATTCGGAAC ACGGTATGTC CACCGTCTCG
GCCGGGCTGC TGTCGATTCT TGTCATGGCA CCGCTTCTGG GCGTGCTGCT CTACGGTGCG
CTGTTCCGCT TCATGCGGGG CAGTTCGATG CTGGTCAAGA TCGTGTCCAC GATCGGTCTG
TCGGTGGCCC TGCCGCCGAT CAGCGATCTG ATCTTCGGTA CCGACACCAT CACCTCGGCG
CCGGGCCTGG CGTCGTTGAA CGACAAGCCG TACCACGTCT TCGGGACCGT GGTCACGACC
GACCAGCTGA TCACCTACGG ATTCCTGGTG TTCACCGTGG TGGCCGGCAC GGCGGTGCTG
CGGTTGACCG ATGTGGGTCT GCGGGTCCGG GCGATGGTCG ACTCGGAGGC GATGGCCTCC
TTGTCGGGCA CCAACCCCGG GCGGGTCTCG CTCGGGGTCT GGGCGGCGAG CTCCACGCTC
GCCGGGCTCG CCGGCATCCT GGTGGCGCCG ACCAACGGGT TGAACACCGG CGGAATGACG
TCCCTCATGT GCGCGGCGAT CGCCGCGGTG GTGGCCGCAC GGCTGCGGTC GCTTCCCGGC
GCGGTGGCCG CCGCGTTGGC GATGGGCGTC ATCACCGACG TCATCCAGAA GTATCTGCCG
ACGAACAGCA CGCTGACCGC GGCGATCGTC CCGAGCATCC CGTTCGCGTT CATGCTGGTG
TTCCTGGTCT TCTACGTGGT CCGGTCCGGT TCGGTCGACG AGAACGCCGG CGCCGGCGGG
CCGCTCGACG CGGCGATCCG GCCGGCGAGC CAGGACGCGG CGAACGCGCC GATCGACGCC
GGCGGCGCGG CCTGGGAGAA ATGGCTCGGC CTCGTCCCGT TCCTCGTCGT CGCCATCCTG
CCGCTCGTCT TCAGCGGCTC GCCCTACTGG CTGGGCCTCA CCGCGGTCGG GCTGTGCTAC
GGCGTCGTCT ATCTGACCTT CACGGTGGCC ACCGGCGAGG GCGGGATGCT GTGGCTCTCG
CAGATCATCT TCGCCGGCGC GGGGGCGATC GGGGCCGCCC AGTTCGCCAC GGTGTGGCAC
CTACCGGTCC TGGTAGCCGT CGTGCTCGGC GGGGCCGTCG CGGCCGTGGC GGGCGCGCTG
CTCGGACTGC TCACCATCCG GCTCGGTGAC CTGTACGTGG GCCTTGCCAC GCTGACGTTC
GGGCTCCTTG TCGAAACACT GATCTTCACC CGCAACCGGT TCCAGCAGAG CGGTATGGGA
GTTCTGCTTC CGCGGCCGGG TTGGGCCACC GATGACCTGT CCTTCGCCTA CCTGGCGCTC
GCGGTCTTCG TGGTGTTCGC GGCGCTCACC TGGAACCTGC GCCGTTCGAC GAGCGGGCTC
GCGCTGCGGG GGGTGCGTGA CAGCGAGCCG GCGGCGCGAA CACTGGGCCT TTCCGTGGTA
CAGGTGAAGG TCATCGTCGG CGCCCTGGCC GCCTTCGTCG CCGCGGTGGG CGGCGGCTTC
GTCTCCATGT ACACGATGGT GGCCCAGCCG TCGTCCTACG CGACGTTCGC CGGCCTGGTG
TGGCTGGCGA TCATGGTCAG CCTGGGGATC CGGTCGATCA CCGCCGCGGC GGTGAGCGGA
CTGTCCTACA CCCTTCTCCA GGGCGTCCTG CAGACCTACG CGCCGGCTCG GCTGGGCGGG
ATCCTGCCGA TCCTGTTCGG TCTCGCCGCC ATCGGGGTCG CCCGCAACCC CGAGGGGGCG
ATCATGCAGA GCGGCCCGGC GCTGCGCCGG CTGGTGGTGC GGCTGTTGAC GCGTACACCG
GTACCGGAAA CCCCCGCGCC GGCCGGACCC GACGAGTCCC CGATGTCCGT GACCGGGCCG
CCCGCAACCC AAACCGTCCC GGCGGGGGCG ACCCCGACCA CCGCGACCCC AGCGACCACG
AAGGCGGAAC GATGA
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| Protein sequence | MLQYVLAGLA LGSIYAIASS ALVITYVSTG VFNFAFGSMA FFVARFYYWL NSEHGMSTVS
AGLLSILVMA PLLGVLLYGA LFRFMRGSSM LVKIVSTIGL SVALPPISDL IFGTDTITSA
PGLASLNDKP YHVFGTVVTT DQLITYGFLV FTVVAGTAVL RLTDVGLRVR AMVDSEAMAS
LSGTNPGRVS LGVWAASSTL AGLAGILVAP TNGLNTGGMT SLMCAAIAAV VAARLRSLPG
AVAAALAMGV ITDVIQKYLP TNSTLTAAIV PSIPFAFMLV FLVFYVVRSG SVDENAGAGG
PLDAAIRPAS QDAANAPIDA GGAAWEKWLG LVPFLVVAIL PLVFSGSPYW LGLTAVGLCY
GVVYLTFTVA TGEGGMLWLS QIIFAGAGAI GAAQFATVWH LPVLVAVVLG GAVAAVAGAL
LGLLTIRLGD LYVGLATLTF GLLVETLIFT RNRFQQSGMG VLLPRPGWAT DDLSFAYLAL
AVFVVFAALT WNLRRSTSGL ALRGVRDSEP AARTLGLSVV QVKVIVGALA AFVAAVGGGF
VSMYTMVAQP SSYATFAGLV WLAIMVSLGI RSITAAAVSG LSYTLLQGVL QTYAPARLGG
ILPILFGLAA IGVARNPEGA IMQSGPALRR LVVRLLTRTP VPETPAPAGP DESPMSVTGP
PATQTVPAGA TPTTATPATT KAER
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