| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3193 |
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| Symbol | |
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| ID | 5671569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3768724 |
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| End bp | 3771201 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242087 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001507507 |
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| Protein GI | 158314999 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.360698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCGTT CATCCTTCAA TGACGGCTGG TCCTTCCGCC GGAAGACCGA CGCGTTCCTG
GAGATCCTCG GCCGGGCCGA CGCCCCCTGG GAGGACGTCC GGCTTCCCCA CGACGCGATG
GTGGGACTAG AGCGCGACGG AGCCGATACC GAGGCTGGTC AGCGCGGCTA CTACCCGAGC
GGGGCATACC AGTACCGGAA GACCTTCTTC GCGCCGGAAA AATACCGGAA CCGGCGAGTA
ACCCTTGAGT TCGAGGGTGT CTACCGGAAT GCCCGGGTGT TCATCAACGG CGATTTCGCG
GCGCAGCGCG CCTACGGCTA CTCCAACTTC TACGTCCACA CAGATCATCT ACTGAAGTAC
GGCAGCAACA ACGAGATCGT CGTGGAGGCG TACAGCGGCA ACGACACCCG CTGGTACTCG
GGTGGCGGCG TCTACCGCAA CACGAAACTG ATCGTCGGCG ATCTGGTTCA CCTCGCACTG
GACGGGGTGA AGATCACAAC TCCGGCCGTC GACGGCGACC TCGCGGTGGT CGCGGTGGCG
ACCGAGTTAC AGAACGAGTC TCCCGTCACC CGGTCGCTCG AAGTGCTCAC CGAGATCGTG
GACGCCGACG GCACGGTCGT CGCCCGGGAC ACCGCTCCGG TCACCGCCTT CATCGGCGAC
CGGCTCACCC TGCGCCAGCG GCTGTCCGTG CCACAGCCGG AGCTGTGGGG GGTGGACCGG
CCCTATCTCT ACCTCTGCCG GACCAGCGTC ACGGCGGACG GTGAGCTACT GGACCAGGAG
ACCACGCGCT TCGGCATCCG TACGCTCACC ATCGACCCGC GGCGGGGCCT GCGCGTCAAC
GGCGAGGTGG TGAACCTGCG TGGCGCCTGC ATCCACCACG ACAACGGGGT GATCGGCGCC
GCGACCATCG ACCGCGCCGA ACAGCGCAGG GTCGAGATCC TCAAACAGGC CGGCTTCAAC
GCCATCCGCA GCTCCCACAA CCCGATGAGC AAGGCGCTCC TCGACACCTG CGACCAGCTC
GGCGTTCTCG TGATCGACGA GCTGTTCGAC GCGTGGACCC GCTCCAAGGT GAGCCAGGAC
TACGCCCTCG ACTTCGCCAC CTGGTGGGAG TCCGACGTGC GGGCGATGGT CGACAAGGAC
TTCAACCATC CCAGTGTCAT CCTCTACTCG ATCGGGAACG AGATCCCGGA GACGGGCACC
GCCGCCGGCG CGGCGATCAG CCGCCGGCTC GCCGAGACGA TCCGCTCGAT CGACAGCACC
AGGTTCGTCA CGAACGGCGT CAACGGACTC CTCGCCGGCG GCCCCGACCT GCTCGCCTCC
TTCCCCGGCG AATCCCGGAA GAAGGACAGC GAGAGCCTCG ACGTCAACGG CTTCATGACG
CGGTTCCGTG AGCTCATGCC AATCCTCATG AGCTCCGAGG TCGTCGGTTC GAAGACCGCC
GAATCGATGG CCTGCCTCGA TGTCGCCGGC TACAACTACC TCGAATCACG GTACGGGCAG
GACGGGGCGC AGTTCCCCAA CCGGGTGATC GTCGGAACCG AGACCTATCC CGCCGACATC
GACACGAACT GGCGGCTCGT CCAGGACCAC AGCCATGTCA TCGGTGACTT CACCTGGACC
GGCTGGGACT ACCTCGGCGA GCCGGGGACC GGCCGGATCG AGTACGAGGG CGACGACGAG
ACCACGAACT CCGCGCTGAA CCACCAGGGC GGCTACCCGT GGCTGACGGC GTGGTGCGGT
GACATCGACA TCACCGGCCA CCGCCGGCCC GCCTCCTACT ACCGCGAGAT CGTGTTCGGC
CTGCGCGGCA AGCCCTACAT CGCCGTCCAC CGTCCCGAGC GCTTCGGTCG GGCGGTCCGG
GTGGCGATGT GGTGGTCGTG GAGCGACTCG GTCTCCAGCT GGAGCTGGAA CGGCCACGAG
GACAGGCCGG TGCGGCTCGA GGTGTACTCC GCGGCGGACG AGATCGAGCT CCTGGTCAAC
GGCCGGCGGG TCGGAACCGC CCCGGCGGGT GAGAAGAACC GGTTCAAGGC CGAGTTCGAG
ACTGTCTACG AGCCCGGCGA GATCGTGGCC GTCGCCTACA CCGGGGGCCG CGAGACCGGC
CGCACCTCGC TGCGCTCCGC GACGGGCGAG GTCCGCCTCG ACGCCGCGGC CGACCGCACC
CGCATCACCG CCGACGACAC CGACCTCGCC TACGTCGCCC TCACGCTCGT CGACGGGGCC
GGCAACCTCT ACAACACCGC CGACCGCAAG GTGGCCGTCG AAGTGACGGG GCCCGCCGTG
CTCCAGGGCT TCGGCAGCGC GGACCCCAGG CCGACCGAGA ACTTCTTCGA CACGGTCCGC
ACGACCTTCG ACGGCCGGGC GCTCGCCGTC ATCCGCCCGA CGGCCCCCGG CTCGATCACC
GTCACCGCCA CCGCGGAGGG CTGCGAGCCG TCCACCGTGC GCATCGAAGC CGAACCCTCG
GGCCCCTCCG CCGAATGA
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| Protein sequence | MIRSSFNDGW SFRRKTDAFL EILGRADAPW EDVRLPHDAM VGLERDGADT EAGQRGYYPS
GAYQYRKTFF APEKYRNRRV TLEFEGVYRN ARVFINGDFA AQRAYGYSNF YVHTDHLLKY
GSNNEIVVEA YSGNDTRWYS GGGVYRNTKL IVGDLVHLAL DGVKITTPAV DGDLAVVAVA
TELQNESPVT RSLEVLTEIV DADGTVVARD TAPVTAFIGD RLTLRQRLSV PQPELWGVDR
PYLYLCRTSV TADGELLDQE TTRFGIRTLT IDPRRGLRVN GEVVNLRGAC IHHDNGVIGA
ATIDRAEQRR VEILKQAGFN AIRSSHNPMS KALLDTCDQL GVLVIDELFD AWTRSKVSQD
YALDFATWWE SDVRAMVDKD FNHPSVILYS IGNEIPETGT AAGAAISRRL AETIRSIDST
RFVTNGVNGL LAGGPDLLAS FPGESRKKDS ESLDVNGFMT RFRELMPILM SSEVVGSKTA
ESMACLDVAG YNYLESRYGQ DGAQFPNRVI VGTETYPADI DTNWRLVQDH SHVIGDFTWT
GWDYLGEPGT GRIEYEGDDE TTNSALNHQG GYPWLTAWCG DIDITGHRRP ASYYREIVFG
LRGKPYIAVH RPERFGRAVR VAMWWSWSDS VSSWSWNGHE DRPVRLEVYS AADEIELLVN
GRRVGTAPAG EKNRFKAEFE TVYEPGEIVA VAYTGGRETG RTSLRSATGE VRLDAAADRT
RITADDTDLA YVALTLVDGA GNLYNTADRK VAVEVTGPAV LQGFGSADPR PTENFFDTVR
TTFDGRALAV IRPTAPGSIT VTATAEGCEP STVRIEAEPS GPSAE
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