| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3187 |
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| Symbol | |
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| ID | 5671563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3755431 |
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| End bp | 3758499 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242081 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001507501 |
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| Protein GI | 158314993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA ACGGAACCGG GACGTCCGCC ATCCAGCCGT GGGACGCGCC TGAGCTCACT
TCCGCGAACC GCGTCCCGAT GCACGCCGTT CCGCACGCTG ATCGTCTCGT CCTGGACGGT
GTCTGGGATT TCCAGCTCCT TCCCGGCCCG CTCGCGGAGC GCGGCGAGCA GTGGCGCACC
GTCGAGGTGC CGGGTGTGTG GACGATGCAG GACAGCGGGG ACCTTCCGCA GTACACGAAC
GTCGTCATGC CGTTCGACTC CCCGTTCCCG CACCCGCCCG AGGCGAACCC GACCGGGGTC
TACCGGCGCG GCTTCACCGC CGCGGCGGAC TGGACGGGGC GACGGGTCGT CCTGCACGTC
GGCGCCGCGG AAAGCGTCCT GCTGGTGCGG GTGAACGGAC GCGACGTCGG CTTCAGCAAG
GACTCCCACC TCGCGGCCGA GTTCGACGTG ACCAGGTTCG TCCGGCCCGG GACGAACGAA
CTCGAGCTGA CGGTCGTGAA GTGGTCGGAC GCCTCGTTCG TCGAGGATCA GGACCACTGG
TGGCACGGCG GCATCACCCG CTCGGTCTAC CTCTACACCA CCGCTCCCGT TTACCTGGCC
GACATCCAGG CGATGGCCGA CCTGCATGTG ACGGCAGCAG CAACCGGCAG CCTGCGGCTG
GACGTGAAGA TCGGCGGCGC CGGGACGCGC ACCGCCGGCT GGACGGTGCG CTCCCGGATC
GCGGGACTGT ACGAACCGGA CCCGCAGCCC GTCCTGGAAG CGGGTGCCGC GACGGGTATG
CCCCAGGCCG GGGCGGGTTC GGGCTACCCG GATGAGCCGC CGCCCTCGCT GATTCCCGAC
GGTCTGCTGG ACCTGCTGTC CCTCGGTGCT TCGGGGGCGC CGCTCCCGCC CGAGCTGAAG
GCCCGGGCCC AGGCGATGCA GGAACGGGCG ATGCCGACCC GTGTCGGCCG TACGCGGTTC
GAGGGCGAGG GCCTCGCCGT CGCGCCGTGG TCGGCGGAGA ACCCGCGTCT GTACCCGTTG
GAGGTCGAAC TCGTCGCGCC GGACGGTGCG GTCGTCGAAC ACGCCACGAT CCGGGTCGGT
TTCCGCCGGG TCGAGATCCG CGGTCGGAAC CTGCTGGTCA ACGGCGGCCG GGTGTGGATC
CAGGGCGTGA ACCGGCACGA CTTCAACGCG CGGACCGGCC GGGTCATCAC CGCCGGGCAG
CTGCGCGCCG AACTCGCGCT GCTCAAGCGG TTCAACGTCA ACGCGGTTCG CACTTCCCAC
TACCCCAACG ACCCGCTGTT CCTCGATCTG TGCGACGAGT ACGGCCTGTA TGTCGTGGAC
GAGGCGAACA TCGAGGCGCA CGCCCATGCC GGAACGGTCT GCGGGGACCC GCGCTACCTC
GGCGCGTTCG TGGACCGGGT GTCGCGCATG GTGCTGCGCG ACAAGAACCA TCCCTGCGTG
ATCTTCTGGT CGCTCGGCAA CGAGAGCGGT TACGGCCCCA ACCACGACGC CGCGGCTGGG
TGGGCCCGCG CCTACGACCC CAGCCGGCCC CTGCACTACG AAGGGGCGAT CAGCGCCGAC
TGGCACGGCG GCCACCGGGC CACCGACGTC GTCTGCCCCA TGTACCCCGC CTTCGACGCG
CTGCGCGCCT ACGCGGCGCA CCCCGACGCC GACCGCCCCG TGATCCTCTG CGAGTACGCC
TACTCCCAGG GCAACTCGAC CGGCGGGCTC GGCACCTACT GGGACCTGTT CGAGTCCACT
CCCGGCCTGC AGGGCGGGTT CATCTGGGAG CTCTACGACC ACGGCCTCGA CCCCGACGGC
GACGGCCGGT TCCGCTATGG CGGGGACTTC GGCGACCAGC CCAACGACGG CGTCGTCTGC
ATCAACGGCA TCCTGTTCTC CGACGGCGCC CCCAAGCCCG CCTTCCACGA GGCGCGCCAC
CTCTTCGCGC CCGTCCGGGT CCTGTCCGGT GCCACCGAGG CGCGTCTCGG CCGGGTGCGG
CTGAGGAACC GGCAGACCTT CGAGGACCTC TCCGGTCTCC GCCTCGCGCT CCACGTCGAA
CGGACCGACG GGCCGGGCGA TCCGACGCTG GTCGCGGCGC CGGCCATCCC CGCCGGCGGC
GAAGGCGTCC TCGACCTCCC CGAGACAGTC ACCGCGCAGC TCACCGGGCC GGATGCCGTC
GCCCTGGCCC TCGTCGTCCA GCTCGCCGAC GCGACGCCGT GGGCCGAGCA GGGCACCGAA
CTCGCCCGGC TCCAGGTCCT GCTCGACGTC GATGTGCCTG ACCTGATCGA AACCCGTCCC
GCCACCGGCG TGCTGCGCCT GGACGGCGAC GGGCTGCTCC AGCACCCCGT CCTGAGCGCG
GCACCGGTGT TGTCCTTCTG GCGCGCGCCG ACCGACAACG ACACCTCCAT CGGCCTCGAC
TCCCGGTTCG TGCGCACCGG TCTGTTCCGC GTCACCCGCA CGCTGGTCGA CCAGAAGATC
ACCGGCTCCA CGGCGACGAT CGTCAGCCGG TACACCGCCG CCTACGGCGC GGAGATCGAA
CACCGGCAGC GAATCACCGC CCTGTCCGAC ACCAGCTTCC GTTTCGACGA ACACGTCACC
CTGCCGGAGG AGCTCGACGA CATCCCCCGC CTGGGCGTCA CCTTCGCCAC CAACCCCGGC
TTCGAACACC TCACGTGGTT CGGCCTCGGG CCCCACGAGA CCTACCCCGA CCGGAAGAAG
TCAGGACTTC TCGGCCGCTG GACCTCCCAG GTCGACGACC TGTTCGTCCC CTACCTGCTG
CCGCAGGAGA ACGGCGGCCG CGCCGACGTC CAAGAACTCA CCCTCACCGG CCCCGACGGG
TACGCAATCA CCATCAGCAC CGACCGACCC GTGCAGATGA ACGTGTCGCA CTACCAGGTA
GCCGACCTGG AACCCGCCCG GCACACCTGG GAGCTCAGGC CCCGGGCGGA GACGTACGTT
CACCTCGACC TCGCGCACCG GGGACTCGGC ACCGGAGCCC TCGGCCCGGA CACCCTGGCG
TGGTACCGGG TACGCGGCGG CAGGTACGAG TGGTCCTGGC AGCTTGATCT CACCGCCCCG
CAGCGCTGA
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| Protein sequence | MTVNGTGTSA IQPWDAPELT SANRVPMHAV PHADRLVLDG VWDFQLLPGP LAERGEQWRT
VEVPGVWTMQ DSGDLPQYTN VVMPFDSPFP HPPEANPTGV YRRGFTAAAD WTGRRVVLHV
GAAESVLLVR VNGRDVGFSK DSHLAAEFDV TRFVRPGTNE LELTVVKWSD ASFVEDQDHW
WHGGITRSVY LYTTAPVYLA DIQAMADLHV TAAATGSLRL DVKIGGAGTR TAGWTVRSRI
AGLYEPDPQP VLEAGAATGM PQAGAGSGYP DEPPPSLIPD GLLDLLSLGA SGAPLPPELK
ARAQAMQERA MPTRVGRTRF EGEGLAVAPW SAENPRLYPL EVELVAPDGA VVEHATIRVG
FRRVEIRGRN LLVNGGRVWI QGVNRHDFNA RTGRVITAGQ LRAELALLKR FNVNAVRTSH
YPNDPLFLDL CDEYGLYVVD EANIEAHAHA GTVCGDPRYL GAFVDRVSRM VLRDKNHPCV
IFWSLGNESG YGPNHDAAAG WARAYDPSRP LHYEGAISAD WHGGHRATDV VCPMYPAFDA
LRAYAAHPDA DRPVILCEYA YSQGNSTGGL GTYWDLFEST PGLQGGFIWE LYDHGLDPDG
DGRFRYGGDF GDQPNDGVVC INGILFSDGA PKPAFHEARH LFAPVRVLSG ATEARLGRVR
LRNRQTFEDL SGLRLALHVE RTDGPGDPTL VAAPAIPAGG EGVLDLPETV TAQLTGPDAV
ALALVVQLAD ATPWAEQGTE LARLQVLLDV DVPDLIETRP ATGVLRLDGD GLLQHPVLSA
APVLSFWRAP TDNDTSIGLD SRFVRTGLFR VTRTLVDQKI TGSTATIVSR YTAAYGAEIE
HRQRITALSD TSFRFDEHVT LPEELDDIPR LGVTFATNPG FEHLTWFGLG PHETYPDRKK
SGLLGRWTSQ VDDLFVPYLL PQENGGRADV QELTLTGPDG YAITISTDRP VQMNVSHYQV
ADLEPARHTW ELRPRAETYV HLDLAHRGLG TGALGPDTLA WYRVRGGRYE WSWQLDLTAP
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