Gene Franean1_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3126 
Symbol 
ID5671504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3682196 
End bp3682981 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID641242023 
Producthypothetical protein 
Protein accessionYP_001507443 
Protein GI158314935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA GGCACGAGCC CTTGCCGATC ATGGAGTTCT CGACGCTTCA TGTTCGCCAG 
GGAAGGCCGT GCCCGCCGGT GCCATCATCT CCCCTCGCCG CCGTGGTCGA CGAGCTTGCC
GCGCAGGTTC CGGACAGGAT CAGCCAGCCG CGTCTGGTCA CTGAAGGTGA CCAGATGGCG
TTGCTGGAAG CTCTCGCGCA GGTACCGGAC CTACGGCGAC GACGCGGAGT GCGTCACCCC
TTCGCCGCGC TCCTGGCGAT CGCGGTGTGC GCCATGCTCA CGGCCGGATC GAGACAGACA
CGCGCGCTCA AAGCCGTCAC TGTCCCGGCC GGGCTCGGGT TTCCCCACGC CGCCCAGGCC
ATCCAGCTCA CTCGCACCTC CCGCCCGATC AACAAGAACA CGAAGAAGAC CGAGGGCAAG
CGCCGCCAGC GACGTGAGAC CGTCTACGCG ATCTGCACCC TGCCCGCCCA CGACGCCCTA
CCGGCCGAAC TCGCCACTTG GATCCGAGGC CACTGGTCCA TCGAGGTCCG CCTGCGCTGG
GTCCGTGACG TCACACTGGG TGAAGATCTC CACCAGGCTC GTACCTGGCA GCGGACCCCA
GGTCGTGGCC ACTCTCCGCA ACCTGATGAT CAGCCTGTTC CGGTTCGCCG GCTTCACCAA
CATCGCCCGA GCCCTACGCC ACCACGCCCG CCATCCCGAC CAGGCCATCA CCCTCGCGAC
CAGCACAAAC ACGACCTTGC AATGACCCTG ACTTGCAGAG GCAAATCGAG GTGGTCAGCA
TATTGA
 
Protein sequence
MHGRHEPLPI MEFSTLHVRQ GRPCPPVPSS PLAAVVDELA AQVPDRISQP RLVTEGDQMA 
LLEALAQVPD LRRRRGVRHP FAALLAIAVC AMLTAGSRQT RALKAVTVPA GLGFPHAAQA
IQLTRTSRPI NKNTKKTEGK RRQRRETVYA ICTLPAHDAL PAELATWIRG HWSIEVRLRW
VRDVTLGEDL HQARTWQRTP GRGHSPQPDD QPVPVRRLHQ HRPSPTPPRP PSRPGHHPRD
QHKHDLAMTL TCRGKSRWSA Y