Gene Franean1_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3109 
Symbol 
ID5671488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3666345 
End bp3666860 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content71% 
IMG OID641242007 
Producthypothetical protein 
Protein accessionYP_001507427 
Protein GI158314919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCCAA GCGGACAACG ATCCGATCGT GCTCGCGCAC GCTCGCGCTC TACTCACCGG 
CAGTGGGGAA GGGCGCACCG CCTACCTGGA CGCCGACCTG CGGGAACCCG AGAAGATCCT
CGCCTCGGCC GAGCTGCGCG ACACGTTGGA CCTGACCCGC CCCGTCGCGC TGTCCGTCAT
CGCGCTCTGC TGCACTTCAT CCCGGACTCC GACGACCCGT ACGGCATCGT CCGCCGGTAC
CTCGACGCGC TTCCCGCCGG CAGCTATCTG GCGCTCACCC ACGTCACTCC TGACTTCGCA
CCCGAGGATG TCCAGCGCGT CGTTGATGTC TACCGGGGCC AGGGCATCCC CGCCACGGTC
CGCACCCGCA GCGAGGTCGC ACGTTTCTTC GACGGCCTCG ACGTTGTCGA GCCCGGGGTG
CAGCCGGTGC ACCGCTGGCG GCCCGACGAC AGCGGGCCGG ACGGCCCGAC TGACGCCGAG
GTCGACGTGT ACGGCGGTCT CGCCCGCCTC CCGTAG
 
Protein sequence
MSPSGQRSDR ARARSRSTHR QWGRAHRLPG RRPAGTREDP RLGRAARHVG PDPPRRAVRH 
RALLHFIPDS DDPYGIVRRY LDALPAGSYL ALTHVTPDFA PEDVQRVVDV YRGQGIPATV
RTRSEVARFF DGLDVVEPGV QPVHRWRPDD SGPDGPTDAE VDVYGGLARL P