Gene Franean1_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3024 
Symbol 
ID5671406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3558839 
End bp3559216 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID641241926 
ProductDoxX family protein 
Protein accessionYP_001507346 
Protein GI158314838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.459473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCT TCCTGTGGGT AGTGCAGATC GTCCTTGCCA CCGTGTTCGC CGGCGCGGGC 
CTGATGAAGC TGACCCGTCC GATCGACGTG CTTCGAGCGA AGATCGGCGG TTGGGTCGAT
GGCGTTCCTA CCCCGTTGAT TCGGCTGGTC GGCGCCTTGG AGGTCGCTGC CGCTGTCGGG
CTCGCCCTTC CCCCGGCGGT CGGAGTGCTC GCTTGGCTCG CCCCGCTTGC CGCGGTTGGC
CTGGCCGTCA TCATGGTCGG TGCGGCCGTG ATCCACGGTC GCCGCGGCGA GTGGGCGTCG
ACCGGTCAGA ACGTCCTACT CGGACTCGTG GCAGCAGGTC TTGCATGGGC CCGTTTCGGC
CCCTATCCCT TCAGTTGA
 
Protein sequence
MNIFLWVVQI VLATVFAGAG LMKLTRPIDV LRAKIGGWVD GVPTPLIRLV GALEVAAAVG 
LALPPAVGVL AWLAPLAAVG LAVIMVGAAV IHGRRGEWAS TGQNVLLGLV AAGLAWARFG
PYPFS