| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2995 |
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| Symbol | |
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| ID | 5671378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3521760 |
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| End bp | 3522335 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241898 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507318 |
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| Protein GI | 158314810 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATCA CCGGGGGCGC TCAGGGGATC GGGCTCGAAA CAGCGCACCA GGCCGTTCGC
CGCAGCGCAC GAGTGGCCCT GCTCGACATC CACTCCGAGG CGGTGGCCCG GGCTGCGGCC
GAGCTGGGCG ATGAAAAGGT CGCACTCGGT CTCACCGCGG ATGTGCGTGA TGTGACGTCC
CTGCAGAGGG CGCTTTCCGA GAAATCCGAA AGGTTCGGCG GTTACGAAAC GGTCATCGTG
AACGCCGGAA TCGGTGCTGG AATGAGGGCC TTCCGCGCCA CCTCGCCGAC CGACTTCCAG
CGGATCATCG ACGTGAATCT ACACGGAGCC ATCCGCACGG TCCGGGCCTC CCTCAACCAG
GTCGTCGGCC TACAGGGCCA CTACGTGCTG ATCTCAGCGG TCTTAGCCTT CAACAATGGT
GTCTTGCAGT CTCCTTACGC GGCCTCGAAG GCAGGCACAG GAGGCCCTGG GGGGCTCTCT
CACACCGCTT GGCTACCAGG TCACCGCAAC CCCGCCGCCC CCAGACGCAG CGGCCACCTG
ATCATCCGCA GCCACCCAAC TCGAGCGGAC CGGTAG
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| Protein sequence | MAITGGAQGI GLETAHQAVR RSARVALLDI HSEAVARAAA ELGDEKVALG LTADVRDVTS
LQRALSEKSE RFGGYETVIV NAGIGAGMRA FRATSPTDFQ RIIDVNLHGA IRTVRASLNQ
VVGLQGHYVL ISAVLAFNNG VLQSPYAASK AGTGGPGGLS HTAWLPGHRN PAAPRRSGHL
IIRSHPTRAD R
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