| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2947 |
|---|
| Symbol | |
|---|
| ID | 5671333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3468102 |
|---|
| End bp | 3469235 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641241853 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507273 |
|---|
| Protein GI | 158314765 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3662] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.985948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC ACACCTCAAC CATCGAACCC ACCGCTGCGC CGCGGACGCT GACCGTCCCG
ACAGCCGCCG CTCCGGTCCG TTCGGAAGAA GTCGACTGGG CGCTCGGTCC CGGCTCGGTT
ACCTGGGAAG TCATGAAGGA CCCTGCCGTG TTCCTGGTCG GGCTGCTTCG AGAGGCCATT
CTCCTGACGC TTCACCCACC GTTCGCCGCC GCCGCGATAG ATCATGACAG CTTTCTGGAT
GACCCGGTGA TGAGGTTCCG GCGAGTGGCC ATGTACGCCT ACTCGGCCAC GTACGGCACC
AAGGCTGACG CCGAGAGGGT CAGCGCGATG GTGCGTCGGC GGCACTTCCA GATCGTGGGC
GTCGAGCCTC TGAGCGGCGA GCCGTACCGG GCAGACTCGG AGTACGAGCT GGCATTGACC
CAGGCCATGC TGGCGGCGTC GTTCCTGGCG GTGTACGAGG AAGTCCACGG CCGCCTCTCC
ACCGCCCGAC GTGACCAGTT CCTCATGGAG CAGAAGGTGC CCGCGGCGCT GCTGGGCGTA
CCGCCCGAGC ACATGCCCTC GACGTGGGGT GATCTTCAGC GGTTCCTCGC CAGGGCGCGG
GACGGCTTCG CCACCGGCTA CCAGGCCCGG GAGATCATCG ATCCCTTCTC CCGAGGCAGC
TACCCGCCTG GTAGCGTGCT CGGGGACCTG CCGACACTGA AGCGACAGGC CGCTATGTGG
CTGATCCGGG CGATCGCCGA CATGGCCATT CTCACCATGA ACGATGAGGA ACGCGCCCTC
CTCGCGATCG ACCGACGGCC CAAGCTGCGG TCGCAGGCAG CAATCCGGCT CTCGCTCAGG
GCACTGTCCC GGTACCTGCG TAGCGAGAAG GGAACGCTCG CCTTCGAGGG GTTCGTCAAG
GCGAACACCG CGAAGATCAT GCGGCGAGCC TTCGAGGTCG ACAGGAAGCC GGGCCGCCGT
GCCCGGGAAA AGGCATTCCG GGTCCCGGAC GCCGCCGGCT TCGTCGTCCA GCTGCCCGAC
CTCGTGCACA ACTGGCCTGG CTCCCGGAGC ATCGCCGAGC AGCCGAAGCC AGTGGAGGGC
CCGTCGGCTC ACGAGACTCG AGCCGGGGCC GGGAGAGCCC GCCGCGCCGG ATGA
|
|---|
| Protein sequence | MTDHTSTIEP TAAPRTLTVP TAAAPVRSEE VDWALGPGSV TWEVMKDPAV FLVGLLREAI
LLTLHPPFAA AAIDHDSFLD DPVMRFRRVA MYAYSATYGT KADAERVSAM VRRRHFQIVG
VEPLSGEPYR ADSEYELALT QAMLAASFLA VYEEVHGRLS TARRDQFLME QKVPAALLGV
PPEHMPSTWG DLQRFLARAR DGFATGYQAR EIIDPFSRGS YPPGSVLGDL PTLKRQAAMW
LIRAIADMAI LTMNDEERAL LAIDRRPKLR SQAAIRLSLR ALSRYLRSEK GTLAFEGFVK
ANTAKIMRRA FEVDRKPGRR AREKAFRVPD AAGFVVQLPD LVHNWPGSRS IAEQPKPVEG
PSAHETRAGA GRARRAG
|
|---|
| |